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The map label for this gene is ymdE [H]

Identifier: 218694566

GI number: 218694566

Start: 1205856

End: 1206347

Strand: Direct

Name: ymdE [H]

Synonym: EC55989_1143

Alternate gene names: 218694566

Gene position: 1205856-1206347 (Clockwise)

Preceding gene: 218694563

Following gene: 218694567

Centisome position: 23.39

GC content: 46.54

Gene sequence:

>492_bases
ATGATTACGGAATCAGGCATTGCGCTGGATATTAGCTGTGATAACACGCCGCGCCAGCAGGTTATTGGGGGAACGCAGGC
TGCGTTGAATGAATTTGCCACGCTGCTGATGGCCGCTGGATACGAACCGGTTAAACTCGGTGTGAGCGGTGCCTGGCACA
CGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTT
CTGATGAACGTAACAGCAAAAAGCGAGGTCGCTCCGTCAATTATCAAAGAAAATCTCTCATTACACTTAACTCATACGGT
GAAATGGACTGAATCTTTCGATACATTTCTGAATATGCCAACCCCGGTAGCTTTCCTTGAAATAAGTAATAAGCCCTATT
TGGGGAATATGTTAAATGATTTTGCTGGCGTGGTTCAGCAACGAGTTATGCATTGTCGTAAAGCATTTAGTGATGCAAAG
GTATTCAAATGA

Upstream 100 bases:

>100_bases
GAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGGCGGTTAAAGGCATCA
ACCGCGAACAACTGCAGACG

Downstream 100 bases:

>100_bases
TTCCTGATTATTTAACTTTTATTCGCTTTCAGGATAAACGAAATCTGATATACATTTATGCTATTGGACTTATTCTGATA
GGCTTTTATTGGAAGAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MITESGIALDISCDNTPRQQVIGGTQAALNEFATLLMAAGYEPVKLGVSGAWHTRLMEDGVQAMRDYLAGLDIASPEHQV
LMNVTAKSEVAPSIIKENLSLHLTHTVKWTESFDTFLNMPTPVAFLEISNKPYLGNMLNDFAGVVQQRVMHCRKAFSDAK
VFK

Sequences:

>Translated_163_residues
MITESGIALDISCDNTPRQQVIGGTQAALNEFATLLMAAGYEPVKLGVSGAWHTRLMEDGVQAMRDYLAGLDIASPEHQV
LMNVTAKSEVAPSIIKENLSLHLTHTVKWTESFDTFLNMPTPVAFLEISNKPYLGNMLNDFAGVVQQRVMHCRKAFSDAK
VFK
>Mature_163_residues
MITESGIALDISCDNTPRQQVIGGTQAALNEFATLLMAAGYEPVKLGVSGAWHTRLMEDGVQAMRDYLAGLDIASPEHQV
LMNVTAKSEVAPSIIKENLSLHLTHTVKWTESFDTFLNMPTPVAFLEISNKPYLGNMLNDFAGVVQQRVMHCRKAFSDAK
VFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001227
- InterPro:   IPR016035 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17926; Mature: 17926

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITESGIALDISCDNTPRQQVIGGTQAALNEFATLLMAAGYEPVKLGVSGAWHTRLMEDG
CCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHH
VQAMRDYLAGLDIASPEHQVLMNVTAKSEVAPSIIKENLSLHLTHTVKWTESFDTFLNMP
HHHHHHHHHCCCCCCCCHHEEEEECCHHHHHHHHHHCCCEEEEEEEEEHHHHHHHHHCCC
TPVAFLEISNKPYLGNMLNDFAGVVQQRVMHCRKAFSDAKVFK
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MITESGIALDISCDNTPRQQVIGGTQAALNEFATLLMAAGYEPVKLGVSGAWHTRLMEDG
CCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHH
VQAMRDYLAGLDIASPEHQVLMNVTAKSEVAPSIIKENLSLHLTHTVKWTESFDTFLNMP
HHHHHHHHHCCCCCCCCHHEEEEECCHHHHHHHHHHCCCEEEEEEEEEHHHHHHHHHCCC
TPVAFLEISNKPYLGNMLNDFAGVVQQRVMHCRKAFSDAKVFK
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]