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The map label for this gene is ymcD

Identifier: 218694521

GI number: 218694521

Start: 1158106

End: 1158411

Strand: Reverse

Name: ymcD

Synonym: EC55989_1096

Alternate gene names: 218694521

Gene position: 1158411-1158106 (Counterclockwise)

Preceding gene: 218694522

Following gene: 218694520

Centisome position: 22.47

GC content: 57.52

Gene sequence:

>306_bases
ATGAAACACAAGCTTTCTGCAATCCTTATGGCCTTCATGTTGACGACGCCAGCTGCGTTTGCTGCCCCTGAAGCAACAAA
CGGGACCGAGGCAACGACGGGTACTACTGGCACCACAACGACCACTACCGGCGCAACCACGACTGCTACTACCACTGGTG
GCGTGGCTGCTGGCGCTGTCGGCACGGCGACAGTTGTCGGTGTGGCAACGGCTGTTGGTGTGGCGACGTTGGCAGTTGTT
GCAGCAAATGACAGTGGCGATGGCGGTTCTCATAACACCTCAACCACCACGTCCACTACACGCTAA

Upstream 100 bases:

>100_bases
GGTATGAGGAAAGGGAGATTTCACAAGGATGTTATACTCAAAGTAGACAATCCTGATCTCAAGCGTACGTATTGTCCATG
CGATGAATAAAGGAAAAGTT

Downstream 100 bases:

>100_bases
TACTGCTTTAACGCGTCGAAATTAAAGTTAAATGATACCCGGTTGCGATATTCGTACCGGGCTTTAGAGATTTGCATTTT
TTTAATTAACCTTTCAAGGA

Product: conserved hypothetical protein; putative inner membrane protein

Products: NA

Alternate protein names: Group 4 capsule protein A homolog

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTGATTTATTTGGVAAGAVGTATVVGVATAVGVATLAVV
AANDSGDGGSHNTSTTTSTTR

Sequences:

>Translated_101_residues
MKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTGATTTATTTGGVAAGAVGTATVVGVATAVGVATLAVV
AANDSGDGGSHNTSTTTSTTR
>Mature_101_residues
MKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTGATTTATTTGGVAAGAVGTATVVGVATAVGVATLAVV
AANDSGDGGSHNTSTTTSTTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein. Note=When the protein is overexpressed

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081813, Length=101, Percent_Identity=100, Blast_Score=177, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GFCA_ECOLI (P75885)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   A64840
- RefSeq:   AP_001616.1
- RefSeq:   NP_415507.2
- ProteinModelPortal:   P75885
- DIP:   DIP-12710N
- STRING:   P75885
- EnsemblBacteria:   EBESCT00000003355
- EnsemblBacteria:   EBESCT00000015659
- GeneID:   945029
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5133
- KEGG:   eco:b0987
- EchoBASE:   EB3496
- EcoGene:   EG13732
- GeneTree:   EBGT00050000011762
- HOGENOM:   HBG470345
- OMA:   PEAANGA
- ProtClustDB:   CLSK879895
- BioCyc:   EcoCyc:G6508-MONOMER
- Genevestigator:   P75885

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9508; Mature: 9508

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x188a5010)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTGATTTATTTGGVAAGAV
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEECCCCCCCCCCCC
GTATVVGVATAVGVATLAVVAANDSGDGGSHNTSTTTSTTR
HHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCH
>Mature Secondary Structure
MKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTGATTTATTTGGVAAGAV
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEECCCCCCCCCCCC
GTATVVGVATAVGVATLAVVAANDSGDGGSHNTSTTTSTTR
HHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503