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The map label for this gene is stfR [H]

Identifier: 218694503

GI number: 218694503

Start: 1137661

End: 1139064

Strand: Direct

Name: stfR [H]

Synonym: EC55989_1078

Alternate gene names: 218694503

Gene position: 1137661-1139064 (Clockwise)

Preceding gene: 218694502

Following gene: 218694504

Centisome position: 22.07

GC content: 59.97

Gene sequence:

>1404_bases
ATGACAGTAAAAATTTCTGGCGTGCTTAAAGATGGCACAGGAAAACCAGTACAGAACTGCACCATTGTGCTGAAGGCCAG
ACGAACCAGCAGCACGGTGGTGGTGAACACGGTGGCCTCTGAAAATCCGGATGAAGCCGGACGTTACAGCATGGATGTTG
AGCATGGTCAGTACAGCGTCACCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGGACCATCACCGTGTATGAAGAT
TCCCGACCCGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAGGATGATGCCCGTCCTGAGGCACTGCGCCGTTTTGA
ACTGATGGTGGAAGAGGTGGTGCGTAACGCAGAGGAGGCGAAGAAGAATGCCGGAGAGGCGGAGACGTCAGCGAGGAATG
CCGGCATATCAGCCAGTCAGGCAGAAGAGAGCGCTGCAAATGCTGACACTTCAGCAGGGGATGCATCGGAGTCAGCCCGG
CAGGCGGCAGAAAGTGCAGCCTCAGCAAAGCAGTCAGAGGAGGCGTCCTCGTCCTCGGCCTCTGCGGCCGCTCAAAAAGC
CAGTGAGTCATTACAAAGTGCAACAGATGCTGAGTTGTCAAAAAAGACGGCAGAAAGTGCAGCCGGTAATGCAGCCAGGG
ATGCAACGACCGCAACAGAAAAAGCCCGGGAGTCAGCAGAAAGCGCACAGTCAGCGGAACAAAGCAGGATAGCGGCGGAA
GAGGCCGTAAACCGAATCCCCACCGTGGTGGGACCTCCCGGGCCAAAGGGGGAACCGGGGCCCGCGGGTCCTCAGGGGCC
GAAGGGAGATAAAGGAGAGCGTGGCGACACCGGCCCGGCAGGGGCAACCGGTGAACGGGGGCCGGCAGGTGATGCTGGTC
CGGCAGGCCCGCAGGGGCCGAAAGGCGACAGGGGAGAGACCGGTCTGACGGGAAATGCAGGTCCTCAGGGACCTAAAGGG
GATGCGGGAGCTGCAGGCCCGGCAGGGCCACAGGGACCGAAAGGGGATACGGGAGCTGCAGGGCCGGCAGGGCCACAGGG
ACCGAAAGGGGATACGGGAGCTGCAGGCCCGGCAGGGCCACAGGGACCGAAAGGGGATGCAGGAGTCGCAGGTCCGGCAG
GACCACAGGGACCATCCGGAAGCCCTGACAGCGGGCTGTTTGGTGTCGGTTCTTTTGTTCTTGCGGCGTATTACCAGACG
TATTATTCGGGGGACCGTGCCCCTGGCTCAACTGTTGCCGGGTCATCACTGTCTGCATGCTGCCTTTCGAATGGTACTCC
CCTGGTTGCTTCCGGTAATGTGGGGGAGACCCGTTTACCGGGCACGTGGCGTGCATGTGGTCCGATGCTATGGACATCAT
CTCCGGGTATCAGACAGGCAGGATTATTTCAGCGCATATCATAG

Upstream 100 bases:

>100_bases
TCCACCTTATGGGGTGAACTGCGTTTGAGGAAACGTAAAGTTACACTGTCCTGAAGCCCGTGGCGTCACTGCTGCGGGCT
TTTTTTATTGGTGGAAAAGT

Downstream 100 bases:

>100_bases
AGGAGGTCATGGTGGATAAGGGAAAAGAGATTCTTGCAGTACGAAATGCAGCCAGCAACGAATATGGCGGGATAAACTGT
GAGGTGCAGTTTGAAGACGC

Product: Putative tail fiber protein (modular protein)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MTVKISGVLKDGTGKPVQNCTIVLKARRTSSTVVVNTVASENPDEAGRYSMDVEHGQYSVTLLVEGFPPSHAGTITVYED
SRPGTLNDFLGAMTEDDARPEALRRFELMVEEVVRNAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGDASESAR
QAAESAASAKQSEEASSSSASAAAQKASESLQSATDAELSKKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAE
EAVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPAGDAGPAGPQGPKGDRGETGLTGNAGPQGPKG
DAGAAGPAGPQGPKGDTGAAGPAGPQGPKGDTGAAGPAGPQGPKGDAGVAGPAGPQGPSGSPDSGLFGVGSFVLAAYYQT
YYSGDRAPGSTVAGSSLSACCLSNGTPLVASGNVGETRLPGTWRACGPMLWTSSPGIRQAGLFQRIS

Sequences:

>Translated_467_residues
MTVKISGVLKDGTGKPVQNCTIVLKARRTSSTVVVNTVASENPDEAGRYSMDVEHGQYSVTLLVEGFPPSHAGTITVYED
SRPGTLNDFLGAMTEDDARPEALRRFELMVEEVVRNAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGDASESAR
QAAESAASAKQSEEASSSSASAAAQKASESLQSATDAELSKKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAE
EAVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPAGDAGPAGPQGPKGDRGETGLTGNAGPQGPKG
DAGAAGPAGPQGPKGDTGAAGPAGPQGPKGDTGAAGPAGPQGPKGDAGVAGPAGPQGPSGSPDSGLFGVGSFVLAAYYQT
YYSGDRAPGSTVAGSSLSACCLSNGTPLVASGNVGETRLPGTWRACGPMLWTSSPGIRQAGLFQRIS
>Mature_466_residues
TVKISGVLKDGTGKPVQNCTIVLKARRTSSTVVVNTVASENPDEAGRYSMDVEHGQYSVTLLVEGFPPSHAGTITVYEDS
RPGTLNDFLGAMTEDDARPEALRRFELMVEEVVRNAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGDASESARQ
AAESAASAKQSEEASSSSASAAAQKASESLQSATDAELSKKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAEE
AVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPAGDAGPAGPQGPKGDRGETGLTGNAGPQGPKGD
AGAAGPAGPQGPKGDTGAAGPAGPQGPKGDTGAAGPAGPQGPKGDAGVAGPAGPQGPSGSPDSGLFGVGSFVLAAYYQTY
YSGDRAPGSTVAGSSLSACCLSNGTPLVASGNVGETRLPGTWRACGPMLWTSSPGIRQAGLFQRIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tail fiber family [H]

Homologues:

Organism=Homo sapiens, GI183583553, Length=170, Percent_Identity=37.0588235294118, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI55743098, Length=107, Percent_Identity=50.4672897196262, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI55743106, Length=107, Percent_Identity=50.4672897196262, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI240255535, Length=107, Percent_Identity=50.4672897196262, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI56847616, Length=133, Percent_Identity=46.6165413533835, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI65301115, Length=133, Percent_Identity=46.6165413533835, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI48762934, Length=136, Percent_Identity=50, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI5803080, Length=130, Percent_Identity=49.2307692307692, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI115392133, Length=125, Percent_Identity=48.8, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI154759255, Length=196, Percent_Identity=37.7551020408163, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI115527062, Length=172, Percent_Identity=39.5348837209302, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI115527066, Length=172, Percent_Identity=39.5348837209302, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI73486666, Length=138, Percent_Identity=47.8260869565217, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI115527070, Length=172, Percent_Identity=39.5348837209302, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI156616290, Length=181, Percent_Identity=36.4640883977901, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI110735435, Length=138, Percent_Identity=46.3768115942029, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI98985806, Length=134, Percent_Identity=46.2686567164179, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI18105016, Length=112, Percent_Identity=46.4285714285714, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI98985810, Length=134, Percent_Identity=46.2686567164179, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI11386161, Length=129, Percent_Identity=49.6124031007752, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI4502961, Length=188, Percent_Identity=38.2978723404255, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI18105018, Length=112, Percent_Identity=46.4285714285714, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI299523257, Length=134, Percent_Identity=46.2686567164179, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI145701009, Length=105, Percent_Identity=47.6190476190476, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI122937273, Length=131, Percent_Identity=44.2748091603053, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI299523253, Length=134, Percent_Identity=46.2686567164179, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI32140760, Length=123, Percent_Identity=45.5284552845528, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI119829187, Length=205, Percent_Identity=33.6585365853659, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI89363017, Length=137, Percent_Identity=45.2554744525547, Blast_Score=65, Evalue=9e-11,
Organism=Escherichia coli, GI87081892, Length=123, Percent_Identity=87.8048780487805, Blast_Score=238, Evalue=9e-64,
Organism=Caenorhabditis elegans, GI17569903, Length=147, Percent_Identity=43.5374149659864, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17539078, Length=128, Percent_Identity=45.3125, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17535735, Length=124, Percent_Identity=45.9677419354839, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17551704, Length=193, Percent_Identity=35.2331606217617, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45549584, Length=145, Percent_Identity=42.7586206896552, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008969
- InterPro:   IPR014766
- InterPro:   IPR011083
- InterPro:   IPR005003
- InterPro:   IPR013609 [H]

Pfam domain/function: PF07484 Collar; PF03335 Phage_fiber; PF08400 phage_tail_N [H]

EC number: NA

Molecular weight: Translated: 46112; Mature: 45981

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKISGVLKDGTGKPVQNCTIVLKARRTSSTVVVNTVASENPDEAGRYSMDVEHGQYSV
CEEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEECCCEEEE
TLLVEGFPPSHAGTITVYEDSRPGTLNDFLGAMTEDDARPEALRRFELMVEEVVRNAEEA
EEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
KKNAGEAETSARNAGISASQAEESAANADTSAGDASESARQAAESAASAKQSEEASSSSA
HHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SAAAQKASESLQSATDAELSKKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPAGDAGPAGPQGP
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KGDRGETGLTGNAGPQGPKGDAGAAGPAGPQGPKGDTGAAGPAGPQGPKGDTGAAGPAGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QGPKGDAGVAGPAGPQGPSGSPDSGLFGVGSFVLAAYYQTYYSGDRAPGSTVAGSSLSAC
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
CLSNGTPLVASGNVGETRLPGTWRACGPMLWTSSPGIRQAGLFQRIS
HHCCCCCEEEECCCCCCCCCCCHHHHCCEEECCCCCCHHHHHHHHCC
>Mature Secondary Structure 
TVKISGVLKDGTGKPVQNCTIVLKARRTSSTVVVNTVASENPDEAGRYSMDVEHGQYSV
EEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEECCCEEEE
TLLVEGFPPSHAGTITVYEDSRPGTLNDFLGAMTEDDARPEALRRFELMVEEVVRNAEEA
EEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
KKNAGEAETSARNAGISASQAEESAANADTSAGDASESARQAAESAASAKQSEEASSSSA
HHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SAAAQKASESLQSATDAELSKKTAESAAGNAARDATTATEKARESAESAQSAEQSRIAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPAGDAGPAGPQGP
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KGDRGETGLTGNAGPQGPKGDAGAAGPAGPQGPKGDTGAAGPAGPQGPKGDTGAAGPAGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QGPKGDAGVAGPAGPQGPSGSPDSGLFGVGSFVLAAYYQTYYSGDRAPGSTVAGSSLSAC
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
CLSNGTPLVASGNVGETRLPGTWRACGPMLWTSSPGIRQAGLFQRIS
HHCCCCCEEEECCCCCCCCCCCHHHHCCEEECCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]