| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218694493
Identifier: 218694493
GI number: 218694493
Start: 1126822
End: 1127568
Strand: Direct
Name: 218694493
Synonym: EC55989_1068
Alternate gene names: NA
Gene position: 1126822-1127568 (Clockwise)
Preceding gene: 218694492
Following gene: 218694494
Centisome position: 21.86
GC content: 52.07
Gene sequence:
>747_bases ATGGCAATACCAAATCCTCTTGAGCCGGTGAAAGGTTCCGGCACCACACTATGGGTGTACACCGGCAAGGATGATGCTTA TGCCAACCCGTTGTCAGATGATGGCTGGCAGCGACTGGCTAAGGTGAAGGATCTGACGCCGGGCGAGATGACGGCTGAAT CCTACGATGATAACTACCTGGATGATGAAGACGCGGACTGGACCGCGACCGGGCAGGGACAGAAATCTGCAGGTGATACC AGTTTTACGCTGGCCTGGAAACCGGGAGAGGAAGGCCAGAAAGGGCTTATAGGCTGGTTTGAAAGCGGCGATGTCCGGGC CTATAAAATCCGTTTTCCGAATGGCATGGTGGATGTGTTTCGTGGCTGGGTCAGCAGTATCGGTAAGGCCGTGACGGCGA AAGAAGTGATCACCCGCACGGTGAAAGTCACTAACGTGGGTAAACCTTCTGTAGCGGAAGAACGCAGCAAAATTACGCCG GTCACTGCAATTAAGGTAACGCCGACAGGTACGGTTGAAAAAGGGAAAACAACCACCCTGACCGTTACTGTGGAACCGGA AAATGCAACGGATAAGACATTCAGGGCGATTTCCGCCGATCCATCAAAAGCCACCATTAGCGTGAAAGATATGACGATTA CTGTGACGGGGGTTAAGGATGGAAAAGTCAGCATCCCTGTGATTTCCGGTAATGGTCAGTTTGCTGCGGTGGCTGAAATT ACCGTTAATAATGTGCCGGGTGGCTAA
Upstream 100 bases:
>100_bases ATGAATCTTCAGGGGTATGACTACCGCCGGGATGATGAGTTTATGATGTGGGGATCGGCAGATCTCCTGTGGAAAATTAC CTACGAGATGTGAGGACGAT
Downstream 100 bases:
>100_bases AGAGCTGAGAGATAAGCGATGTTCCTGAAAACAGAACAATTTGAATATAACGGTGTATCCGTCACGCTTTCTGAGCTGTC TGCGCTGCAGCGTATTGAGC
Product: Major tail protein V
Products: NA
Alternate protein names: Gifsy-2 Prophage VmtV; Tail Protein; Tail-Like Protein; Ig Domain-Containing Domain-Containing Protein
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MAIPNPLEPVKGSGTTLWVYTGKDDAYANPLSDDGWQRLAKVKDLTPGEMTAESYDDNYLDDEDADWTATGQGQKSAGDT SFTLAWKPGEEGQKGLIGWFESGDVRAYKIRFPNGMVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITP VTAIKVTPTGTVEKGKTTTLTVTVEPENATDKTFRAISADPSKATISVKDMTITVTGVKDGKVSIPVISGNGQFAAVAEI TVNNVPGG
Sequences:
>Translated_248_residues MAIPNPLEPVKGSGTTLWVYTGKDDAYANPLSDDGWQRLAKVKDLTPGEMTAESYDDNYLDDEDADWTATGQGQKSAGDT SFTLAWKPGEEGQKGLIGWFESGDVRAYKIRFPNGMVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITP VTAIKVTPTGTVEKGKTTTLTVTVEPENATDKTFRAISADPSKATISVKDMTITVTGVKDGKVSIPVISGNGQFAAVAEI TVNNVPGG >Mature_247_residues AIPNPLEPVKGSGTTLWVYTGKDDAYANPLSDDGWQRLAKVKDLTPGEMTAESYDDNYLDDEDADWTATGQGQKSAGDTS FTLAWKPGEEGQKGLIGWFESGDVRAYKIRFPNGMVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPV TAIKVTPTGTVEKGKTTTLTVTVEPENATDKTFRAISADPSKATISVKDMTITVTGVKDGKVSIPVISGNGQFAAVAEIT VNNVPGG
Specific function: Unknown
COG id: COG5492
COG function: function code N; Bacterial surface proteins containing Ig-like domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26376; Mature: 26245
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIPNPLEPVKGSGTTLWVYTGKDDAYANPLSDDGWQRLAKVKDLTPGEMTAESYDDNYL CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC DDEDADWTATGQGQKSAGDTSFTLAWKPGEEGQKGLIGWFESGDVRAYKIRFPNGMVDVF CCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCHHHHH RGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPVTAIKVTPTGTVEKGKTTTL HHHHHHHCCHHHHHHHHHEEEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEEE TVTVEPENATDKTFRAISADPSKATISVKDMTITVTGVKDGKVSIPVISGNGQFAAVAEI EEEECCCCCCCHHEEEECCCCCCEEEEEEEEEEEEEECCCCEEEEEEECCCCCEEEEEEE TVNNVPGG EECCCCCC >Mature Secondary Structure AIPNPLEPVKGSGTTLWVYTGKDDAYANPLSDDGWQRLAKVKDLTPGEMTAESYDDNYL CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC DDEDADWTATGQGQKSAGDTSFTLAWKPGEEGQKGLIGWFESGDVRAYKIRFPNGMVDVF CCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCHHHHH RGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPVTAIKVTPTGTVEKGKTTTL HHHHHHHCCHHHHHHHHHEEEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEEE TVTVEPENATDKTFRAISADPSKATISVKDMTITVTGVKDGKVSIPVISGNGQFAAVAEI EEEECCCCCCCHHEEEECCCCCCEEEEEEEEEEEEEECCCCEEEEEEECCCCCEEEEEEE TVNNVPGG EECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA