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The map label for this gene is ydfR [H]

Identifier: 218694478

GI number: 218694478

Start: 1115458

End: 1116264

Strand: Direct

Name: ydfR [H]

Synonym: EC55989_1052

Alternate gene names: 218694478

Gene position: 1115458-1116264 (Clockwise)

Preceding gene: 218694477

Following gene: 218694480

Centisome position: 21.64

GC content: 46.59

Gene sequence:

>807_bases
ATGAAGAAAAAATACGAACTGGGTGTTAAAGGGATAAATAATTATCCGGATAAGATTACTGTTACTGTGGCACTGGAAAT
TGGTGGGTATCCGTCACTGTTGTTGCCAGATGTGGCGATTAGTCTTGACCGTACTGAAGGTGCCACGCTGGAGTTTTACG
AAGCTGAGGCGAAAAAGCAGGCGAAGCAGTTTTTCATGGATGTTGCTGCCGGGTTATGTGAAGGGGATGAGCAGTCGCCG
GAAAAGCGCCCCGTAATTTTAGAGGCGCAGAATGTGTGGATAACCTACAAAGGAAAGCTACCGGGAAGAATTACTGGTTC
TCTGAAGATGCCGCCGTCAACACTGCGGTCAGAAAAAGAGGCGTCTTGTCTGCAGTCTGAGTACTCCATTACGGTTAAAA
GTGCCGGAGAGGAAGGAAATAAACGTTATTTTATTGCGTCTGCACCTGATAAAGATCAGGAATGGGAGTGTAACCGGCCA
TCCTTTGTTGTATACGGAGATGGCGGGAAAATAACCATCTCAGAAAATGGGAAATTAACACCGCCATCGCACCAGCATAG
TGAGGCGCTCATTGAATTTGCCATTGATTACCTGAAGAACAATAAAAAGCAGGGGCTGATGAAGCGCATTGGTCGTTGCA
TGGGATATCTGCAGGTAGCAGCTGAGATTGAAATGATGGCCAGTGGTGCTGACAATGATGCAGTTGTGCTGGAGGCTCTT
CTGCGTGATTTTGATAATACGCCCTTTAAGAAAGCACCTGTTGACTGGATGCAGCCGGGGATGACTTATCTGAAAGGGCG
TATATAA

Upstream 100 bases:

>100_bases
GTGCTGGGGAGTCTGCTGTTTGGGCTGCTGACATATCTGACTAACCTGTATTTCAAAATCAGAGAGGACCGTCGTAAGGC
GGCGCGGGGGGAGTAAAGCG

Downstream 100 bases:

>100_bases
GGTGGCTCGTTATCTGTTGCTGGATAATCGACTGAAGATGCGTTCTTTTTGTGTTTTTGCGTAATGATTGTCCCACTCAC
AATCAAGGTAGCTTAATTCT

Product: conserved hypothetical protein from phage origin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKKKYELGVKGINNYPDKITVTVALEIGGYPSLLLPDVAISLDRTEGATLEFYEAEAKKQAKQFFMDVAAGLCEGDEQSP
EKRPVILEAQNVWITYKGKLPGRITGSLKMPPSTLRSEKEASCLQSEYSITVKSAGEEGNKRYFIASAPDKDQEWECNRP
SFVVYGDGGKITISENGKLTPPSHQHSEALIEFAIDYLKNNKKQGLMKRIGRCMGYLQVAAEIEMMASGADNDAVVLEAL
LRDFDNTPFKKAPVDWMQPGMTYLKGRI

Sequences:

>Translated_268_residues
MKKKYELGVKGINNYPDKITVTVALEIGGYPSLLLPDVAISLDRTEGATLEFYEAEAKKQAKQFFMDVAAGLCEGDEQSP
EKRPVILEAQNVWITYKGKLPGRITGSLKMPPSTLRSEKEASCLQSEYSITVKSAGEEGNKRYFIASAPDKDQEWECNRP
SFVVYGDGGKITISENGKLTPPSHQHSEALIEFAIDYLKNNKKQGLMKRIGRCMGYLQVAAEIEMMASGADNDAVVLEAL
LRDFDNTPFKKAPVDWMQPGMTYLKGRI
>Mature_268_residues
MKKKYELGVKGINNYPDKITVTVALEIGGYPSLLLPDVAISLDRTEGATLEFYEAEAKKQAKQFFMDVAAGLCEGDEQSP
EKRPVILEAQNVWITYKGKLPGRITGSLKMPPSTLRSEKEASCLQSEYSITVKSAGEEGNKRYFIASAPDKDQEWECNRP
SFVVYGDGGKITISENGKLTPPSHQHSEALIEFAIDYLKNNKKQGLMKRIGRCMGYLQVAAEIEMMASGADNDAVVLEAL
LRDFDNTPFKKAPVDWMQPGMTYLKGRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787837, Length=74, Percent_Identity=45.945945945946, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009759 [H]

Pfam domain/function: PF07041 DUF1327 [H]

EC number: NA

Molecular weight: Translated: 29756; Mature: 29756

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKYELGVKGINNYPDKITVTVALEIGGYPSLLLPDVAISLDRTEGATLEFYEAEAKKQ
CCCCEECCCCCCCCCCCEEEEEEEEEECCCCCHHHCCEEEEEECCCCCEEEEEHHHHHHH
AKQFFMDVAAGLCEGDEQSPEKRPVILEAQNVWITYKGKLPGRITGSLKMPPSTLRSEKE
HHHHHHHHHHHHCCCCCCCCCCCCEEEEECEEEEEEECCCCCEEEECEECCHHHHHCHHH
ASCLQSEYSITVKSAGEEGNKRYFIASAPDKDQEWECNRPSFVVYGDGGKITISENGKLT
HHHHHHHCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEECCCCCCC
PPSHQHSEALIEFAIDYLKNNKKQGLMKRIGRCMGYLQVAAEIEMMASGADNDAVVLEAL
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LRDFDNTPFKKAPVDWMQPGMTYLKGRI
HHHCCCCCCCCCCHHHHCCCHHHHCCCC
>Mature Secondary Structure
MKKKYELGVKGINNYPDKITVTVALEIGGYPSLLLPDVAISLDRTEGATLEFYEAEAKKQ
CCCCEECCCCCCCCCCCEEEEEEEEEECCCCCHHHCCEEEEEECCCCCEEEEEHHHHHHH
AKQFFMDVAAGLCEGDEQSPEKRPVILEAQNVWITYKGKLPGRITGSLKMPPSTLRSEKE
HHHHHHHHHHHHCCCCCCCCCCCCEEEEECEEEEEEECCCCCEEEECEECCHHHHHCHHH
ASCLQSEYSITVKSAGEEGNKRYFIASAPDKDQEWECNRPSFVVYGDGGKITISENGKLT
HHHHHHHCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEECCCCCCC
PPSHQHSEALIEFAIDYLKNNKKQGLMKRIGRCMGYLQVAAEIEMMASGADNDAVVLEAL
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LRDFDNTPFKKAPVDWMQPGMTYLKGRI
HHHCCCCCCCCCCHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]