Click here to switch to the map view.

The map label for this gene is ycbX

Identifier: 218694422

GI number: 218694422

Start: 1069360

End: 1070469

Strand: Reverse

Name: ycbX

Synonym: EC55989_0996

Alternate gene names: 218694422

Gene position: 1070469-1069360 (Counterclockwise)

Preceding gene: 218694429

Following gene: 218694412

Centisome position: 20.77

GC content: 50.45

Gene sequence:

>1110_bases
GTGGTGACATTAACCCGGCTTTTTATTCATCCTGTTAAATCGATGCGCGGCATTGGTCTTACACATGCTCTGGCTGATGT
CAGTGGTCTGGCCTTCGATCGCATCTTTATGATCACGGAACCTGACGGTACGTTTATTACCGCTCGCCAGTTTCCCCAGA
TGGTACGGTTTACTCCTTCACCTGTGCATGATGGCTTGCATCTCACCGCACCAGATGGCAGTAGCGCATATGTTCGTTTT
GCTGATTTCGCCACACAAGACGCACCAACCGAAGTTTGGGGCACACATTTTACCGCGCGAATTGCGCCAGACGCGATCAA
CAAATGGCTAAGTGGATTTTTCTCCCGCGAAGTGCAATTACGCTGGGTGGGGCCACAAATGACCCGGCGCGTGAAACGCC
ACAACACTGTACCTCTGTCATTTGCTGATGGCTATCCTTACCTTCTTGCTAACGAAGCCTCGTTACGTGATCTCCAACAA
CGTTGTCCGGCCAGTGTAAAAATGGAGCAATTCCGCCCCAATCTGGTGGTTTCCGGCGCGTCAGCCTGGGAAGAAGATCG
CTGGAAAGTGATTCGCATTGGTGATGTGGTGTTTGATGTGGTTAAACCTTGTAGCCGCTGTATTTTCACCACCGTCAGCC
CAGAAAAAGGGCAAAAACATCCGGCAGGCGAACCATTAAAAACATTGCAATCTTTCCGCACTGCCCAGGATAACGGCGAT
GTCGATTTTGGTCAGAATTTAATTGCCCGTAATAGCGGCGTGATTCGCGTTGGCGATGAGGTGGAAATTCTGGCAACGGC
TCCGGCAAAAATTTACGGCGCAGCTGCCGCTGATGATACCGCCAACATCACGCAACAACCGGACGCAAATGTAGATATTG
ACTGGCAGGGACAGGCATTTCGTGGAAATAACCAACAGGTGTTGCTGGAGCAATTAGAAAATCAGGGAATTCGTATCCCT
TATTCTTGCCGCGCGGGCATTTGTGGAAGTTGCCGTGTTCAGCTTTTAGAAGGCGAAGTCACGCCGCTGAAAAAATCAGC
AATGGGCGATGATGGCACCATTCTTTGCTGTAGCTGTGTACCGAAGACTGCACTTAAGTTGGCGCGTTAG

Upstream 100 bases:

>100_bases
AGCCTAATGGGACAGGCGCTAAGAAAATTGTTGCGCATTATAGCTAATAAGCGCGTCATGTCATAAAGTTGAGGGCTTAT
TTTCATTTGAGGACCGCACC

Downstream 100 bases:

>100_bases
ACAGCCTGTTCGAGGCTGAAGCTGTCAACATTAACCTGCGGTTTCAGCCTGTCGTTCATGATTTTAATGGCGTCGCCCAA
CTGCATCGCGCGACCCGCAA

Product: putative 2Fe-2S cluster-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MVTLTRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGTFITARQFPQMVRFTPSPVHDGLHLTAPDGSSAYVRF
ADFATQDAPTEVWGTHFTARIAPDAINKWLSGFFSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQ
RCPASVKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRTAQDNGD
VDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAAAADDTANITQQPDANVDIDWQGQAFRGNNQQVLLEQLENQGIRIP
YSCRAGICGSCRVQLLEGEVTPLKKSAMGDDGTILCCSCVPKTALKLAR

Sequences:

>Translated_369_residues
MVTLTRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGTFITARQFPQMVRFTPSPVHDGLHLTAPDGSSAYVRF
ADFATQDAPTEVWGTHFTARIAPDAINKWLSGFFSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQ
RCPASVKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRTAQDNGD
VDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAAAADDTANITQQPDANVDIDWQGQAFRGNNQQVLLEQLENQGIRIP
YSCRAGICGSCRVQLLEGEVTPLKKSAMGDDGTILCCSCVPKTALKLAR
>Mature_369_residues
MVTLTRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGTFITARQFPQMVRFTPSPVHDGLHLTAPDGSSAYVRF
ADFATQDAPTEVWGTHFTARIAPDAINKWLSGFFSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQ
RCPASVKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRTAQDNGD
VDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAAAADDTANITQQPDANVDIDWQGQAFRGNNQQVLLEQLENQGIRIP
YSCRAGICGSCRVQLLEGEVTPLKKSAMGDDGTILCCSCVPKTALKLAR

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Homo sapiens, GI224600454, Length=287, Percent_Identity=33.1010452961672, Blast_Score=136, Evalue=3e-32,
Organism=Homo sapiens, GI31542713, Length=278, Percent_Identity=31.294964028777, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI157388923, Length=241, Percent_Identity=23.6514522821577, Blast_Score=79, Evalue=8e-15,
Organism=Escherichia coli, GI1787179, Length=369, Percent_Identity=99.4579945799458, Blast_Score=763, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17540702, Length=279, Percent_Identity=30.4659498207885, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17561286, Length=258, Percent_Identity=31.0077519379845, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71990971, Length=255, Percent_Identity=31.3725490196078, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI25147498, Length=238, Percent_Identity=27.3109243697479, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI45550400, Length=287, Percent_Identity=29.616724738676, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI17647607, Length=249, Percent_Identity=27.710843373494, Blast_Score=79, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR005302
- InterPro:   IPR005303
- InterPro:   IPR011037 [H]

Pfam domain/function: PF00111 Fer2; PF03473 MOSC; PF03476 MOSC_N [H]

EC number: NA

Molecular weight: Translated: 40661; Mature: 40661

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTLTRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGTFITARQFPQMVRFTPS
CEEEHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEEHHHCCHHHCCCCC
PVHDGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIAPDAINKWLSGFFSREVQL
CCCCCCEEECCCCCCEEEEEEECCCCCCCCHHHCCCEEEEECHHHHHHHHHHHHCCEEEE
RWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQRCPASVKMEQFRPNLVVSGA
EEECHHHHHHHHHCCCCEEEECCCCCEEEECCHHHHHHHHHCCCCCCHHHCCCCEEEECC
SAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRTAQDNGD
CCCCCCCEEEEEEHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCC
VDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAAAADDTANITQQPDANVDIDWQGQAF
CCCCCHHHHCCCCEEEECCCEEEEEECCHHHEECCCCCCCCCCCCCCCCCEEEEECCCEE
RGNNQQVLLEQLENQGIRIPYSCRAGICGSCRVQLLEGEVTPLKKSAMGDDGTILCCSCV
CCCCHHHHHHHHHCCCEEEEHHCCCCCCCCCEEEEECCCCCCCHHHCCCCCCCEEEECCC
PKTALKLAR
CHHHHHHCC
>Mature Secondary Structure
MVTLTRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGTFITARQFPQMVRFTPS
CEEEHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEEHHHCCHHHCCCCC
PVHDGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIAPDAINKWLSGFFSREVQL
CCCCCCEEECCCCCCEEEEEEECCCCCCCCHHHCCCEEEEECHHHHHHHHHHHHCCEEEE
RWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQRCPASVKMEQFRPNLVVSGA
EEECHHHHHHHHHCCCCEEEECCCCCEEEECCHHHHHHHHHCCCCCCHHHCCCCEEEECC
SAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRTAQDNGD
CCCCCCCEEEEEEHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCC
VDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAAAADDTANITQQPDANVDIDWQGQAF
CCCCCHHHHCCCCEEEECCCEEEEEECCHHHEECCCCCCCCCCCCCCCCCEEEEECCCEE
RGNNQQVLLEQLENQGIRIPYSCRAGICGSCRVQLLEGEVTPLKKSAMGDDGTILCCSCV
CCCCHHHHHHHHHCCCEEEEHHCCCCCCCCCEEEEECCCCCCCHHHCCCCCCCEEEECCC
PKTALKLAR
CHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]