| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is ybgA
Identifier: 218694130
GI number: 218694130
Start: 753466
End: 753975
Strand: Direct
Name: ybgA
Synonym: EC55989_0690
Alternate gene names: 218694130
Gene position: 753466-753975 (Clockwise)
Preceding gene: 218694129
Following gene: 218694131
Centisome position: 14.62
GC content: 50.0
Gene sequence:
>510_bases ATGAATCAGCAACGATTTGATGACAGCACCCTAATCCGTATCTTCGCCCTTCATGAGTTACATCGACTGAAAGAACATGG CTTAACGCGCGGGGCGCTTCTCGATTATCACAGCCGCTATAAACTCGTCTTTCTGGCGCATTCTCAGCCGGAGTACCGCA AACTTGGCCCGTTCGTGGCTGATATTCACCAGTGGCAAAATCTGGATGATTTTTACAACCAGTACTACCAACGCGTAATT GTTTTGCTTTCTCATCCCGCCAACCCGCGCGATCACACCAACGTTTTGATGCACGTTCAGGGTTATTTTCGCCCGCATAT TGATTCCACAGAACGCCAGCAGTTGGCGGCGCTTATCGACAGTTATCGCCGTGGCGAGCAACCACTTCTTGCGCCGCTGA TGCGTATCAAACACTATATGGCGCTTTATCCTGACGCCTGGCTTTCAGGGCAGCGTTATTTCGAACTTTGGCCGCGTGTG ATTAACTTGCGCCATTCAGGAGTTTTATGA
Upstream 100 bases:
>100_bases AGCAGGCTTTCGTAAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTG TAAACCGTTCAGGAGCAGTA
Downstream 100 bases:
>100_bases TTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCT GCACGCGTGCTGGCGTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF169; TKP [H]
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MNQQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVFLAHSQPEYRKLGPFVADIHQWQNLDDFYNQYYQRVI VLLSHPANPRDHTNVLMHVQGYFRPHIDSTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRV INLRHSGVL
Sequences:
>Translated_169_residues MNQQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVFLAHSQPEYRKLGPFVADIHQWQNLDDFYNQYYQRVI VLLSHPANPRDHTNVLMHVQGYFRPHIDSTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRV INLRHSGVL >Mature_169_residues MNQQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVFLAHSQPEYRKLGPFVADIHQWQNLDDFYNQYYQRVI VLLSHPANPRDHTNVLMHVQGYFRPHIDSTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRV INLRHSGVL
Specific function: Unknown
COG id: COG3272
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786925, Length=169, Percent_Identity=97.6331360946746, Blast_Score=340, Evalue=4e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013560 [H]
Pfam domain/function: PF08349 DUF1722 [H]
EC number: NA
Molecular weight: Translated: 20232; Mature: 20232
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVFLAHSQPEYRKLGPFVA CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEEECCCCCHHHHCHHHH DIHQWQNLDDFYNQYYQRVIVLLSHPANPRDHTNVLMHVQGYFRPHIDSTERQQLAALID HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEECCCCCCCCCHHHHHHHHHHH SYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRVINLRHSGVL HHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNQQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVFLAHSQPEYRKLGPFVA CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEEECCCCCHHHHCHHHH DIHQWQNLDDFYNQYYQRVIVLLSHPANPRDHTNVLMHVQGYFRPHIDSTERQQLAALID HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEECCCCCCCCCHHHHHHHHHHH SYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRVINLRHSGVL HHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6325460; 8905232; 9278503; 8387990 [H]