| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
Click here to switch to the map view.
The map label for this gene is ylbG [H]
Identifier: 218693966
GI number: 218693966
Start: 557512
End: 557946
Strand: Reverse
Name: ylbG [H]
Synonym: EC55989_0517
Alternate gene names: 218693966
Gene position: 557946-557512 (Counterclockwise)
Preceding gene: 218693967
Following gene: 218693965
Centisome position: 10.82
GC content: 48.74
Gene sequence:
>435_bases GTGTCGAATCCTTATCCAAAACAAGAGGTAACTCTCATGCTTCATACTGCCAATCCCGTCATCAAACACAAAGCCGGTTT GCTCAATCTGGCTGAAGAACTCAGCAACGTATCAAAAGCCTGTAAAATCATGGGCGTTTCGCGTGATACGTTTTATCGTT ACCGCGAACTGGTCGCTGAAGGCGGTGTGGATGCGCAGATTAATCGTAGTCGCCGCGCTCCTAACCTTAAGAACCGTACC GATGAGGCAACTGAACAGGCTGTTGTTGATTACGCCGTCGCTTTCCCGACACATGGTCAGCACCGGGCCAGCAACGAGCT GCGTAAACAGGGGGTTTTATCTCCGACAGTGGTGTCCGTTCTGTCTGGTTACTCCATAACCTTGAGAATCTCAAAAGACG ATACTGAACAAATTTTATCAGGTGACGTTCCGTAA
Upstream 100 bases:
>100_bases GAATGGGTTAAGGCGCGGTAATGAGGGACGTATTTGTATTAGTCGCGACTTGATCTGACACATGGCCTTGAAAGGTTGAG AGTTACCGGTTTTGATATGA
Downstream 100 bases:
>100_bases AAAGTTGTATGGAGTTCTCGATGCAGTCGGCGCGACTATCAGTACCCCCGCTGAACCTTGGACTATCGGGCCGCCGTACT GGGGCATGTCACCCTGGCGT
Product: putative regulator with homeodomain-like DNA binding domain
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSNPYPKQEVTLMLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAEGGVDAQINRSRRAPNLKNRT DEATEQAVVDYAVAFPTHGQHRASNELRKQGVLSPTVVSVLSGYSITLRISKDDTEQILSGDVP
Sequences:
>Translated_144_residues MSNPYPKQEVTLMLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAEGGVDAQINRSRRAPNLKNRT DEATEQAVVDYAVAFPTHGQHRASNELRKQGVLSPTVVSVLSGYSITLRISKDDTEQILSGDVP >Mature_143_residues SNPYPKQEVTLMLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAEGGVDAQINRSRRAPNLKNRTD EATEQAVVDYAVAFPTHGQHRASNELRKQGVLSPTVVSVLSGYSITLRISKDDTEQILSGDVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15892; Mature: 15761
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPYPKQEVTLMLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAE CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC GGVDAQINRSRRAPNLKNRTDEATEQAVVDYAVAFPTHGQHRASNELRKQGVLSPTVVSV CCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHH LSGYSITLRISKDDTEQILSGDVP HCCCEEEEEECCCCHHHHHCCCCC >Mature Secondary Structure SNPYPKQEVTLMLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAE CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC GGVDAQINRSRRAPNLKNRTDEATEQAVVDYAVAFPTHGQHRASNELRKQGVLSPTVVSV CCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHH LSGYSITLRISKDDTEQILSGDVP HCCCEEEEEECCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]