Click here to switch to the map view.

The map label for this gene is yagV

Identifier: 218693751

GI number: 218693751

Start: 318887

End: 319597

Strand: Reverse

Name: yagV

Synonym: EC55989_0293

Alternate gene names: 218693751

Gene position: 319597-318887 (Counterclockwise)

Preceding gene: 218693752

Following gene: 218693749

Centisome position: 6.2

GC content: 52.6

Gene sequence:

>711_bases
ATGTTCAGGCGACGTGGCGTAACATTAACTAAGGCCCTGCTGACAGCGGTCTGTATGCTGGCGGCACCTTTGACACAGGC
GATTTCGGTCGGCAATCTGACATTTTCGCTGCCGTCCGAGACTGACTTTGTCAGCAAACGTGTAGTGAATAACAACAAAA
GCGCACGGATATACCGTATTGCCATCAGTGCTATTGATAGCCCGGGCAGCAGTGAATTGCGCACCCGACCGGTGGATGGT
GAACTGCTTTTCGCCCCCCGCCAACTGGCGTTGCAGGCTGGTGAGAGCGAGTATTTTAAATTTTACTATCATGGTCCACG
GGATAACCGCGAGCGCTACTACCGGGTCTCATTTCGCGAAGTCCCCACTCGTAACCAGACAAGACGTAGCCCAACCGGCG
GCGAGGTCAGCACGGAGCCGGTGGTGGTGATGGATACCATTCTGGTAGTACGACCACGTCAGGTTCAGTTTAAATGGTCC
TTCGACAAGGTGACAGGAACGGTAAGTAACACTGGCAACACATGGTTTAAGCTACTGATTAAGCCAGGATGTGATTCGAC
CGAAGAGGAAGGCGATGCCTGGTATCTACGTCCGGGAGACGTGGTTCATCAGCCTGAGTTACGTCAGCCGGGGAATCATT
ATCTGGTCTATAACGACAAATTCATTAAGATTAGCGATTCCTGTCCGGCTAAGCCCCCTTCGGCGGACTAA

Upstream 100 bases:

>100_bases
ACCACAGTCAAATTTTCGATTCCAATGGATAACGCCATTTCGCTGCGTACGGTAGATGATAACGGCTGGTTTGGCGAAGT
CAGCGCTTCAGGAGAGATTC

Downstream 100 bases:

>100_bases
GACTTATCCATCGGTCGAGGGAAGAATTCCACCTCAGAGCCCCAAAAATCGTTTAAATGATGTGGAAGCGATCGTCAATA
TCACCTGTAACGATGGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MFRRRGVTLTKALLTAVCMLAAPLTQAISVGNLTFSLPSETDFVSKRVVNNNKSARIYRIAISAIDSPGSSELRTRPVDG
ELLFAPRQLALQAGESEYFKFYYHGPRDNRERYYRVSFREVPTRNQTRRSPTGGEVSTEPVVVMDTILVVRPRQVQFKWS
FDKVTGTVSNTGNTWFKLLIKPGCDSTEEEGDAWYLRPGDVVHQPELRQPGNHYLVYNDKFIKISDSCPAKPPSAD

Sequences:

>Translated_236_residues
MFRRRGVTLTKALLTAVCMLAAPLTQAISVGNLTFSLPSETDFVSKRVVNNNKSARIYRIAISAIDSPGSSELRTRPVDG
ELLFAPRQLALQAGESEYFKFYYHGPRDNRERYYRVSFREVPTRNQTRRSPTGGEVSTEPVVVMDTILVVRPRQVQFKWS
FDKVTGTVSNTGNTWFKLLIKPGCDSTEEEGDAWYLRPGDVVHQPELRQPGNHYLVYNDKFIKISDSCPAKPPSAD
>Mature_236_residues
MFRRRGVTLTKALLTAVCMLAAPLTQAISVGNLTFSLPSETDFVSKRVVNNNKSARIYRIAISAIDSPGSSELRTRPVDG
ELLFAPRQLALQAGESEYFKFYYHGPRDNRERYYRVSFREVPTRNQTRRSPTGGEVSTEPVVVMDTILVVRPRQVQFKWS
FDKVTGTVSNTGNTWFKLLIKPGCDSTEEEGDAWYLRPGDVVHQPELRQPGNHYLVYNDKFIKISDSCPAKPPSAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the matC family [H]

Homologues:

Organism=Escherichia coli, GI87081712, Length=236, Percent_Identity=99.1525423728814, Blast_Score=485, Evalue=1e-138,
Organism=Escherichia coli, GI1786485, Length=179, Percent_Identity=30.7262569832402, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR016147 [H]

Pfam domain/function: PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 26650; Mature: 26650

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRRRGVTLTKALLTAVCMLAAPLTQAISVGNLTFSLPSETDFVSKRVVNNNKSARIYRI
CCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCHHHHHHHHCCCCCCEEEEE
AISAIDSPGSSELRTRPVDGELLFAPRQLALQAGESEYFKFYYHGPRDNRERYYRVSFRE
EEEECCCCCCCCCEECCCCCCEEECCHHHHEECCCCCEEEEEEECCCCCCCEEEEEEEEE
VPTRNQTRRSPTGGEVSTEPVVVMDTILVVRPRQVQFKWSFDKVTGTVSNTGNTWFKLLI
CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEEHHHEEEEECCCCCEEEEEEE
KPGCDSTEEEGDAWYLRPGDVVHQPELRQPGNHYLVYNDKFIKISDSCPAKPPSAD
CCCCCCCCCCCCEEEECCCCEECCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MFRRRGVTLTKALLTAVCMLAAPLTQAISVGNLTFSLPSETDFVSKRVVNNNKSARIYRI
CCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCHHHHHHHHCCCCCCEEEEE
AISAIDSPGSSELRTRPVDGELLFAPRQLALQAGESEYFKFYYHGPRDNRERYYRVSFRE
EEEECCCCCCCCCEECCCCCCEEECCHHHHEECCCCCEEEEEEECCCCCCCEEEEEEEEE
VPTRNQTRRSPTGGEVSTEPVVVMDTILVVRPRQVQFKWSFDKVTGTVSNTGNTWFKLLI
CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEEHHHEEEEECCCCCEEEEEEE
KPGCDSTEEEGDAWYLRPGDVVHQPELRQPGNHYLVYNDKFIKISDSCPAKPPSAD
CCCCCCCCCCCCEEEECCCCEECCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]