| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218693712
Identifier: 218693712
GI number: 218693712
Start: 280224
End: 280580
Strand: Reverse
Name: 218693712
Synonym: EC55989_0252
Alternate gene names: NA
Gene position: 280580-280224 (Counterclockwise)
Preceding gene: 218693713
Following gene: 218693710
Centisome position: 5.44
GC content: 45.1
Gene sequence:
>357_bases ATGAATAAAGCATCGAACATTATCACAATTAAAGGTCAACCAGCCGCAGTGACATTTGAAGCCGATATCAACGCATTTCG CGGCAAGTTCCTCAATGTAAACGGTTATTGTGACTTTGTAGCCACAAGTATTGAGGCATTATATCGTGAAGGCGAAAGCG CGCTGGATGAGTGGATGGCGGATTGTGAAGAGGACGGTATTGCCCCTTTTCGTGAAGAAGAAGAGCAAAAACGCCTGACG CTTCGTGTTCCTCATCACATTGATTCGCGGCTGACCATCGTCGCCAGACAACATTCCATTTCAAAAAACCAGCTCATTGT TGATGTCTTAGAACGTGAGTTTTCAGCCCAGATGTAA
Upstream 100 bases:
>100_bases ACCAAATTCAGCACACATGAGCCACATCCAAAGAATGTGATGGATAAAGGCGCAGTAGCAGGTCTTAAGGAGTGGTTTGT TAACTGTGTAGGGGTAGATT
Downstream 100 bases:
>100_bases ACAGGTCGGATGCCGCGTGGCATCCGACCTTTTGCCAGTTCGTCAATATTACCCATTTACAAAATCGTCTCTTCCGTCAA TATCCGCCGCGCGCCTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Addiction Module HicB-Related Protein; HicB-Related Protein; Xin-Antitoxin Systems HicB; HicB-Like Protein
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MNKASNIITIKGQPAAVTFEADINAFRGKFLNVNGYCDFVATSIEALYREGESALDEWMADCEEDGIAPFREEEEQKRLT LRVPHHIDSRLTIVARQHSISKNQLIVDVLEREFSAQM
Sequences:
>Translated_118_residues MNKASNIITIKGQPAAVTFEADINAFRGKFLNVNGYCDFVATSIEALYREGESALDEWMADCEEDGIAPFREEEEQKRLT LRVPHHIDSRLTIVARQHSISKNQLIVDVLEREFSAQM >Mature_118_residues MNKASNIITIKGQPAAVTFEADINAFRGKFLNVNGYCDFVATSIEALYREGESALDEWMADCEEDGIAPFREEEEQKRLT LRVPHHIDSRLTIVARQHSISKNQLIVDVLEREFSAQM
Specific function: Unknown
COG id: COG4226
COG function: function code S; Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13400; Mature: 13400
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKASNIITIKGQPAAVTFEADINAFRGKFLNVNGYCDFVATSIEALYREGESALDEWMA CCCCCCEEEECCCCEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHH DCEEDGIAPFREEEEQKRLTLRVPHHIDSRLTIVARQHSISKNQLIVDVLEREFSAQM HHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNKASNIITIKGQPAAVTFEADINAFRGKFLNVNGYCDFVATSIEALYREGESALDEWMA CCCCCCEEEECCCCEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHH DCEEDGIAPFREEEEQKRLTLRVPHHIDSRLTIVARQHSISKNQLIVDVLEREFSAQM HHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA