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The map label for this gene is yadN

Identifier: 218693607

GI number: 218693607

Start: 156400

End: 156984

Strand: Reverse

Name: yadN

Synonym: EC55989_0135

Alternate gene names: 218693607

Gene position: 156984-156400 (Counterclockwise)

Preceding gene: 218693608

Following gene: 218693606

Centisome position: 3.05

GC content: 44.1

Gene sequence:

>585_bases
ATGTCTAAAAAATTAGGTTTTGCCCTGTCTGGTCTTATGCTGGCAATGGTTGCAGGTACTGCTTCTGCTGATATGGATGG
TGGTCAGTTAAATATCAGTGGTCTGGTTGTTGATAACACCTGTGAAACCCGCGTTGACGGCGGTAATAAAGATGGTCTGA
TCCTGCTGCAAACTGCAACTGTTGGTGAAATCGATGCTGGCGTGCTGAATGACACCGTTGGCGCTAAAGCCAAACCTTTC
AGCATCACCGTTGACTGCAGCAAAGCAAATCCGAATCCAGGTAGTACAGCTAAAATGACCTTCGGTTCTGTTTTCTTTGG
TAATAGCAAAGGAACGCTGAACAACGACATGTCTATTAACAACCCGTCTGACGGCGTGAATATCGCTCTGCACAATATTG
ATGGTTCCACTATCAAACAGGTTCAAATTAACAACCCTGGCGATGTGTATACTAAAGCCCTGGATGCAACGACAAAATCT
GCTGTTTATGATTTTAAAGCGTCTTACGTTCGTGCCGTCGCAGACCAAACAGCAACTGCTGGTTATGTAAAAACTAACAC
TGCATACACCATTACTTATCAGTAA

Upstream 100 bases:

>100_bases
TTGCTCATTAATATCTAGCATCTGCTTATAACATTTGTGTCATGAATAGTCATTCTTCAAACCAGTAGTCTGACTAATGG
AATTTTATTCAAGGATTTTT

Downstream 100 bases:

>100_bases
GTATTCACCAATTAAATTGATTGAATGAATATACAGGGAATAGTGTTAATAATTTCTATTTTTATATTATTCCCTGTTTT
AATTAACTCTGTCAGGGATG

Product: putative fimbrial-like adhesin exported protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MSKKLGFALSGLMLAMVAGTASADMDGGQLNISGLVVDNTCETRVDGGNKDGLILLQTATVGEIDAGVLNDTVGAKAKPF
SITVDCSKANPNPGSTAKMTFGSVFFGNSKGTLNNDMSINNPSDGVNIALHNIDGSTIKQVQINNPGDVYTKALDATTKS
AVYDFKASYVRAVADQTATAGYVKTNTAYTITYQ

Sequences:

>Translated_194_residues
MSKKLGFALSGLMLAMVAGTASADMDGGQLNISGLVVDNTCETRVDGGNKDGLILLQTATVGEIDAGVLNDTVGAKAKPF
SITVDCSKANPNPGSTAKMTFGSVFFGNSKGTLNNDMSINNPSDGVNIALHNIDGSTIKQVQINNPGDVYTKALDATTKS
AVYDFKASYVRAVADQTATAGYVKTNTAYTITYQ
>Mature_193_residues
SKKLGFALSGLMLAMVAGTASADMDGGQLNISGLVVDNTCETRVDGGNKDGLILLQTATVGEIDAGVLNDTVGAKAKPFS
ITVDCSKANPNPGSTAKMTFGSVFFGNSKGTLNNDMSINNPSDGVNIALHNIDGSTIKQVQINNPGDVYTKALDATTKSA
VYDFKASYVRAVADQTATAGYVKTNTAYTITYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family

Homologues:

Organism=Escherichia coli, GI1786334, Length=194, Percent_Identity=100, Blast_Score=389, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YADN_ECOLI (P37050)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   E64737
- RefSeq:   AP_000802.1
- RefSeq:   NP_414683.1
- ProteinModelPortal:   P37050
- STRING:   P37050
- EnsemblBacteria:   EBESCT00000002388
- EnsemblBacteria:   EBESCT00000015449
- GeneID:   944841
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW0137
- KEGG:   eco:b0141
- EchoBASE:   EB2232
- EcoGene:   EG12328
- eggNOG:   COG3539
- GeneTree:   EBGT00050000008619
- HOGENOM:   HBG683691
- OMA:   NTMEESF
- ProtClustDB:   CLSK879570
- BioCyc:   EcoCyc:EG12328-MONOMER
- Genevestigator:   P37050
- GO:   GO:0009289
- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779
- Gene3D:   G3DSA:2.60.40.1090

Pfam domain/function: PF00419 Fimbrial; SSF49401 Adhes_bact

EC number: NA

Molecular weight: Translated: 20118; Mature: 19987

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKLGFALSGLMLAMVAGTASADMDGGQLNISGLVVDNTCETRVDGGNKDGLILLQTAT
CCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECC
VGEIDAGVLNDTVGAKAKPFSITVDCSKANPNPGSTAKMTFGSVFFGNSKGTLNNDMSIN
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCC
NPSDGVNIALHNIDGSTIKQVQINNPGDVYTKALDATTKSAVYDFKASYVRAVADQTATA
CCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
GYVKTNTAYTITYQ
CEEECCCEEEEEEC
>Mature Secondary Structure 
SKKLGFALSGLMLAMVAGTASADMDGGQLNISGLVVDNTCETRVDGGNKDGLILLQTAT
CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECC
VGEIDAGVLNDTVGAKAKPFSITVDCSKANPNPGSTAKMTFGSVFFGNSKGTLNNDMSIN
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCC
NPSDGVNIALHNIDGSTIKQVQINNPGDVYTKALDATTKSAVYDFKASYVRAVADQTATA
CCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
GYVKTNTAYTITYQ
CEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503