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The map label for this gene is yubI [H]

Identifier: 218692915

GI number: 218692915

Start: 103583

End: 104008

Strand: Reverse

Name: yubI [H]

Synonym: p1ECUMN_0132

Alternate gene names: 218692915

Gene position: 104008-103583 (Counterclockwise)

Preceding gene: 218692916

Following gene: 218692914

Centisome position: 85.04

GC content: 53.29

Gene sequence:

>426_bases
ATGCAATATGCGAAACCTGTCACTCTGAATGTTGAAGAGTGCGACCGTCTCTCCTTTCTGCCTTACCTGTTTGGCCTGGA
TTTTCTGTATGCCGAGGCATCTGTGTACACGCTGGCGAAAAAAATGATGCCGGAATATGAAGGCGGATTCTGGCACTTCA
TCCGCCTGCCGGACGGTGGCGGTTACATGATGCCGGATGGCGACCGTTTTCATCTGGTTAACGGTGAAAACTGGTTTGAC
CGTACCGTGAGTGCTGATGCCGCAGGCATCATCCTTACCTCCCTTGTGATTAACCGCCAGTTGTGGCTGTACCACGACAG
CGGGGATGCAGGGTTGACACACCTGTACAGGATGCGCGATGCGCAGTTGTGGAGCCACATCGAATTTCACCCCGAATGCA
ACGCGATTTACGCGGCACTTGACTGA

Upstream 100 bases:

>100_bases
GCGGCTTCCCTTGCGCCCTTGCAACCCTGCAGGCCCGGCAAAGATGGAGGCACGGCACCGCCCGGTGTCGCGGAATATGT
GAACAACGGAGGAAAACATC

Downstream 100 bases:

>100_bases
TTAACGGACGGGGCGGCAATGCCGCCCCTGTAAAGGAGACGAGAACATGTACACTGTACTGTTAAAGAAATCATCCGCGA
TGTACTGGATACAGACGTGC

Product: antirestriction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MQYAKPVTLNVEECDRLSFLPYLFGLDFLYAEASVYTLAKKMMPEYEGGFWHFIRLPDGGGYMMPDGDRFHLVNGENWFD
RTVSADAAGIILTSLVINRQLWLYHDSGDAGLTHLYRMRDAQLWSHIEFHPECNAIYAALD

Sequences:

>Translated_141_residues
MQYAKPVTLNVEECDRLSFLPYLFGLDFLYAEASVYTLAKKMMPEYEGGFWHFIRLPDGGGYMMPDGDRFHLVNGENWFD
RTVSADAAGIILTSLVINRQLWLYHDSGDAGLTHLYRMRDAQLWSHIEFHPECNAIYAALD
>Mature_141_residues
MQYAKPVTLNVEECDRLSFLPYLFGLDFLYAEASVYTLAKKMMPEYEGGFWHFIRLPDGGGYMMPDGDRFHLVNGENWFD
RTVSADAAGIILTSLVINRQLWLYHDSGDAGLTHLYRMRDAQLWSHIEFHPECNAIYAALD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the antirestriction protein family [H]

Homologues:

Organism=Escherichia coli, GI1788996, Length=137, Percent_Identity=32.8467153284672, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004914
- ProDom:   PD012854 [H]

Pfam domain/function: PF03230 Antirestrict [H]

EC number: NA

Molecular weight: Translated: 16246; Mature: 16246

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYAKPVTLNVEECDRLSFLPYLFGLDFLYAEASVYTLAKKMMPEYEGGFWHFIRLPDGG
CCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC
GYMMPDGDRFHLVNGENWFDRTVSADAAGIILTSLVINRQLWLYHDSGDAGLTHLYRMRD
CEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH
AQLWSHIEFHPECNAIYAALD
HHHHHCEEECCCCCEEEEEEC
>Mature Secondary Structure
MQYAKPVTLNVEECDRLSFLPYLFGLDFLYAEASVYTLAKKMMPEYEGGFWHFIRLPDGG
CCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC
GYMMPDGDRFHLVNGENWFDRTVSADAAGIILTSLVINRQLWLYHDSGDAGLTHLYRMRD
CEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH
AQLWSHIEFHPECNAIYAALD
HHHHHCEEECCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10366527 [H]