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The map label for this gene is traC

Identifier: 218692883

GI number: 218692883

Start: 79044

End: 81674

Strand: Reverse

Name: traC

Synonym: p1ECUMN_0098

Alternate gene names: 218692883

Gene position: 81674-79044 (Counterclockwise)

Preceding gene: 218692884

Following gene: 218692882

Centisome position: 66.78

GC content: 54.01

Gene sequence:

>2631_bases
ATGAGTAATAACCCACTTGAGGCCGTCACTCAGGCGGTTAACTCCCTCGTCACAGCACTGAAACTGCCTGACGAATCCGC
AAAGGCCAATGAAGTTCTGGGCGAAATGAGCTTCCCGCAGTTCAGCCGTCTGCTGCCGTACCGTGATTACAACCAGGAAT
CCGGTCTGTTCATGAATGACACCACGATGGGCTTTATGCTGGAAGCCATTCCCATCAATGGGGCGAATAAGTCCATTGTG
GAGGCACTCGATCACATGCTGCGCACCAAACTGCCGCGCGGTATTCCGTTGTGTATCCATCTGATGTCCAGTCAGCTGGT
TGGTGACAGGATTGAGTACGGGCTGCGTGAGTTCTCCTGGTCAGGTGAACAGGCTGAACGGTTTAACGCCATTACCCGGG
CCTATTATATGAAAGCGGCAGCGACACAGTTTCCGCTGCCGGAGGGGATGAATCTGCCCCTGACCCTGCGCCATTACCGG
GTATTTATCTCGTACTGTTCTCCCTCGAAGAAAAAAAGCCGGGCTGACATTCTGGAAATGGAAAACCTGGTGAAAATCAT
CCGGGCGTCGTTACAGGGGGCCAGTATCGCCACACAGACGGTGGATGCACAGGCCTTTATCGATATTGTCGGGGAGATGA
TTAACCATAACCCGGACTCCCTGTACCCGAAAAGACGTCAGCTGGACCCGTATTCTGATCTGAATTATCAGTGTGTGGAG
GACAGTTTTGACCTGAATGTCCGGGCTGATTACCTGACGCTGGGCCTGCGTGAGAACGGCAGGAACAGCACGGCCCGTAT
CCTGAATTTCCATCTGGCCCGTAACCCGGAAATCGCCTTCCTGTGGAATATGGCCGACAACTACAGCAACCTGCTGAACC
CGGAACTGTCCATCTCCTGTCCGTTCATCCTGACGCTGACTCTGGTGGTGGAAGACCAGGTGAAAACCCACAGCGAAGCC
AACCTGAAGTACATGGACCTGGAGAAAAAGTCGAAGACCTCCTATGCCAAATGGTTTCCGTCCGTGGAGAAAGAGGCGAA
GGAGTGGGGGGAACTGCGTCAGCGTCTGGGCTCCGGTCAGTCTTCTGTCGTGTCCTACTTCCTCAACATCACAGCATTCT
GCAAGGACAACAATGAAACGGCGCTGGAAGTGGAGCAGGACATCCTGAACAGCTTCCGTAAAAACGGTTTTGAGCTGATT
TCACCGCGCTTTAACCACATGCGCAATTTCCTGACCTGTCTGCCCTTTATGGCCGGGAAAGGGTTGTTTAAACAGCTGAA
AGAGGCCGGAGTGGTTCAGCGCGCAGAGAGCTTTAATGTTGCCAACCTGATGCCGTTAGTGGCGGATAACCCCCTGACAC
CGGCAGGTCTGCTGGCACCCACCTACCGTAACCAGCTGGCGTTTATCGATATTTTCTTCCGGGGGATGAATAACACCAAC
TACAACATGGCGGTCTGTGGCACCTCCGGGGCCGGTAAAACCGGGCTGATACAGCCACTTATCCGCAGCGTGCTGGACTC
CGGGGGCTTTGCCGTGGTGTTCGACATGGGGGATGGCTACAAGTCCCTGTGTGAGAACATGGGTGGCGTATATCTGGACG
GTGAAACCCTGCGTTTTAACCCGTTTGCGAACATCACCGATATTGACCAGTCAGCGGAGCGTGTCCGTGACCAGTTGTCA
GTGATGGCCAGCCCCAACGGTAACCTGGATGAAGTGCATGAAGGTCTGCTGCTGCAGGCGGTCAGGGCCTCCTGGCTGGC
CAAAGAGAACAGGGCACGTATTGATGACGTGGTGGATTTCCTGAAAAACGCCAGTGACAGCGAGCAGTATGCCGGGTCAC
CGACCATCCGCAGCCGTCTGGATGAAATGATTGTGCTGCTTGACCAGTACACTGCCAACGGCACTTATGGCCGGTATTTT
AACTCTGATGAGCCGTCCCTGCGGGATGATGCCAGAATGGTGGTGCTGGAGCTGGGTGGGCTGGAAGACCGTCCGTCACT
GCTGGTTGCGGTGATGTTCAGCCTTATCATTTACATCGAGAACCGGATGTACCGCACGCCGCGTACCCTCAAGAAACTGA
ACGTCATTGATGAAGGCTGGCGTCTGCTGGACTTCAAAAATCGTAAAGTTGGTGAGTTTATTCAAAAAGGTTACCGCACC
TGTCGCCGTCATACCGGTGCCTATATCACCATCACACAGAACATCGTCGACTTTGACTCTGACAAGGCATCCAGCGCAGC
CCGTGCGGCATGGGGTAACTCCTCCTACAAAATTATCCTCAAACAGAGTGCGAAGGAGTTCGCGAAATATAACCAGTTAT
TCCCGGATCAGTTCCAGCCACTGCAGCGCGACATGATTGGTAAGTTTGGTGCGGCCAAAGACCAGTGGTTCAGTTCCTTC
CTGCTGCAGGTGGAAAACCATTCCTCCTGGCACCGTCTGTTTGTGGACCCGTTAAGCCGTGCCATGTACAGCTCTGACGG
CCCGGATTTTGAGTTTGTGCAGCAGAAACGCAGAGAGGGTATGAGTATTCATGAGGCGGTGTGGCAGCTGGCGTGGAAGA
AATCGGGGCCGGAGATGGCTTCGCTGGAGGCCTGGCTGGAAGAACATGAGAAATACAGGAGTGTTGCATGA

Upstream 100 bases:

>100_bases
ATCTCTTATTTGTGCTGTGGTTTCAGGAATGGCACTGCGTGATATATCCACGGCCACAGACTGATATTTTCCTTTTTTAA
ACGCACTAAGGAATACTCAT

Downstream 100 bases:

>100_bases
CCACAACGCAAAAAACGACTGACGTTACAGCCCCCCGACGCAGCCACTGGTGGTGGACCGTGCCGGGATGCCTGGCAATG
GTGTTACTGAACGCAGCCAT

Product: conjugal transfer protein TraC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 876; Mature: 875

Protein sequence:

>876_residues
MSNNPLEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANKSIV
EALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYR
VFISYCSPSKKKSRADILEMENLVKIIRASLQGASIATQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVE
DSFDLNVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEA
NLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELI
SPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN
YNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANITDIDQSAERVRDQLS
VMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAGSPTIRSRLDEMIVLLDQYTANGTYGRYF
NSDEPSLRDDARMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRTLKKLNVIDEGWRLLDFKNRKVGEFIQKGYRT
CRRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLFPDQFQPLQRDMIGKFGAAKDQWFSSF
LLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRREGMSIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA

Sequences:

>Translated_876_residues
MSNNPLEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANKSIV
EALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYR
VFISYCSPSKKKSRADILEMENLVKIIRASLQGASIATQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVE
DSFDLNVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEA
NLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELI
SPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN
YNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANITDIDQSAERVRDQLS
VMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAGSPTIRSRLDEMIVLLDQYTANGTYGRYF
NSDEPSLRDDARMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRTLKKLNVIDEGWRLLDFKNRKVGEFIQKGYRT
CRRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLFPDQFQPLQRDMIGKFGAAKDQWFSSF
LLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRREGMSIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA
>Mature_875_residues
SNNPLEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANKSIVE
ALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRV
FISYCSPSKKKSRADILEMENLVKIIRASLQGASIATQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVED
SFDLNVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEAN
LKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELIS
PRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNY
NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANITDIDQSAERVRDQLSV
MASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAGSPTIRSRLDEMIVLLDQYTANGTYGRYFN
SDEPSLRDDARMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRTLKKLNVIDEGWRLLDFKNRKVGEFIQKGYRTC
RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLFPDQFQPLQRDMIGKFGAAKDQWFSSFL
LQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRREGMSIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA

Specific function: Required for the assembly of mature F-pilin subunits into extended F pili [H]

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002789
- InterPro:   IPR014117 [H]

Pfam domain/function: PF01935 DUF87 [H]

EC number: NA

Molecular weight: Translated: 99301; Mature: 99170

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNPLEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMND
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEEC
TTMGFMLEAIPINGANKSIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSW
CCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
SGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEM
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHH
ENLVKIIRASLQGASIATQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVE
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCEEEC
DSFDLNVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISC
CCCCCEEEEEEEEEEECCCCCCCHHHHHEEEEECCCCEEEEECCHHHHHHHCCCCCEECC
PFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQ
HHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCH
SSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGK
HHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHCH
GLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHCCCHHHCCEEEEEEEEECCCCCC
YNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFN
CEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCEEECCCEEEEC
PFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDF
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LKNASDSEQYAGSPTIRSRLDEMIVLLDQYTANGTYGRYFNSDEPSLRDDARMVVLELGG
HHCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
LEDRPSLLVAVMFSLIIYIENRMYRTPRTLKKLNVIDEGWRLLDFKNRKVGEFIQKGYRT
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHH
CRRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLFPDQFQP
HHHCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCHHHHH
LQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRREG
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
MSIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNNPLEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMND
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEEC
TTMGFMLEAIPINGANKSIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSW
CCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
SGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEM
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHH
ENLVKIIRASLQGASIATQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVE
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCEEEC
DSFDLNVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISC
CCCCCEEEEEEEEEEECCCCCCCHHHHHEEEEECCCCEEEEECCHHHHHHHCCCCCEECC
PFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQ
HHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCH
SSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGK
HHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHCH
GLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHCCCHHHCCEEEEEEEEECCCCCC
YNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFN
CEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCEEECCCEEEEC
PFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDF
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LKNASDSEQYAGSPTIRSRLDEMIVLLDQYTANGTYGRYFNSDEPSLRDDARMVVLELGG
HHCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
LEDRPSLLVAVMFSLIIYIENRMYRTPRTLKKLNVIDEGWRLLDFKNRKVGEFIQKGYRT
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHH
CRRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLFPDQFQP
HHHCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCHHHHH
LQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRREG
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
MSIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2265751; 7915817; 1355084 [H]