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The map label for this gene is trbB

Identifier: 218692873

GI number: 218692873

Start: 71626

End: 72171

Strand: Reverse

Name: trbB

Synonym: p1ECUMN_0087

Alternate gene names: 218692873

Gene position: 72171-71626 (Counterclockwise)

Preceding gene: 218692874

Following gene: 218692872

Centisome position: 59.01

GC content: 55.86

Gene sequence:

>546_bases
ATGTCTCTCACTAAATTACTGCCGGTCATTTTGTTGATGATGGCCACAGGTGTGCAGGCCTCCACCCGGGATGAAATTGA
ACGACTCTGGAATCCGCAGGGTATGGCCGTGCAGCCTGCACAACCGGCAGCAGACACATCAGCCAGAACAGAAAAGCCGG
CTCCCCGCTGGTTCCGCCTCAGCAACGGCAGGCAGGTTAACCTGGCCGACTGGAAGGTGGTGCTGTTTATGCAGGGGCAT
TGCCCTTACTGTCACCAGTTTGACCCGGTACTGAAACAGCTGGCACAGCAGTACGGCTTTTCCGTTTTTCCCTACACCCT
GGATGGTCAGGGGGATACCGCCTTTCCGGAAGCATTACCGGTGCCACCGGACGTGATGCAGACCTTCTTCCCGAATATTC
CGGTGGCCACACCGACCACCTTCCTGGTCAACGTCAACACACTTGAGGCATTACCGCTTTTGCAGGGGGCAACGGATGCC
GCCAGTTTTATGGCGCGGATGGATACCGTTCTGCAGATGTACGGAGAGGAAAAAGGTGCGAAATAA

Upstream 100 bases:

>100_bases
CAGGTGCTGGATGCATGGATTGCACGTGTCAGCCTGGAAGAGCGTGAGGCACTGGAAGCCAGGCAACAGGCCATGATGGA
AGGGCAGCAGGAGGGCGGAC

Downstream 100 bases:

>100_bases
GCAGGTGGTGTTACTCATTGCCGGAATATCCGGCATCGCGACGGGAATAATCGTCAGCCTGAATATCCCCTTTATCCGTC
AGGGGCTTTTTTATCCCGCC

Product: conjugal transfer protein TrbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSLTKLLPVILLMMATGVQASTRDEIERLWNPQGMAVQPAQPAADTSARTEKPAPRWFRLSNGRQVNLADWKVVLFMQGH
CPYCHQFDPVLKQLAQQYGFSVFPYTLDGQGDTAFPEALPVPPDVMQTFFPNIPVATPTTFLVNVNTLEALPLLQGATDA
ASFMARMDTVLQMYGEEKGAK

Sequences:

>Translated_181_residues
MSLTKLLPVILLMMATGVQASTRDEIERLWNPQGMAVQPAQPAADTSARTEKPAPRWFRLSNGRQVNLADWKVVLFMQGH
CPYCHQFDPVLKQLAQQYGFSVFPYTLDGQGDTAFPEALPVPPDVMQTFFPNIPVATPTTFLVNVNTLEALPLLQGATDA
ASFMARMDTVLQMYGEEKGAK
>Mature_180_residues
SLTKLLPVILLMMATGVQASTRDEIERLWNPQGMAVQPAQPAADTSARTEKPAPRWFRLSNGRQVNLADWKVVLFMQGHC
PYCHQFDPVLKQLAQQYGFSVFPYTLDGQGDTAFPEALPVPPDVMQTFFPNIPVATPTTFLVNVNTLEALPLLQGATDAA
SFMARMDTVLQMYGEEKGAK

Specific function: Unknown. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014109
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20030; Mature: 19899

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTKLLPVILLMMATGVQASTRDEIERLWNPQGMAVQPAQPAADTSARTEKPAPRWFRL
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCEEEE
SNGRQVNLADWKVVLFMQGHCPYCHQFDPVLKQLAQQYGFSVFPYTLDGQGDTAFPEALP
CCCCEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCC
VPPDVMQTFFPNIPVATPTTFLVNVNTLEALPLLQGATDAASFMARMDTVLQMYGEEKGA
CCHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
K
C
>Mature Secondary Structure 
SLTKLLPVILLMMATGVQASTRDEIERLWNPQGMAVQPAQPAADTSARTEKPAPRWFRL
CHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCEEEE
SNGRQVNLADWKVVLFMQGHCPYCHQFDPVLKQLAQQYGFSVFPYTLDGQGDTAFPEALP
CCCCEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCC
VPPDVMQTFFPNIPVATPTTFLVNVNTLEALPLLQGATDAASFMARMDTVLQMYGEEKGA
CCHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2536655; 7915817 [H]