| Definition | Escherichia coli UMN026 plasmid p1ESCUM, complete sequence. |
|---|---|
| Accession | NC_011749 |
| Length | 122,301 |
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The map label for this gene is 218692830
Identifier: 218692830
GI number: 218692830
Start: 34056
End: 35435
Strand: Reverse
Name: 218692830
Synonym: p1ECUMN_0041
Alternate gene names: NA
Gene position: 35435-34056 (Counterclockwise)
Preceding gene: 218692831
Following gene: 218692829
Centisome position: 28.97
GC content: 57.1
Gene sequence:
>1380_bases ATGAGTTACTTTTTCGTCACGACGCTACAGGTCTTTTTCTGCATTGCGCTTCTTTCCGGTGTTCTCTGGAGTCGAAACGA TCCTCCCTCTTTACGTCCGCTGACCTGGACGCTGCTGACCGGGCTGATTGCCGGCGTGCTGGCGGGACTGTTTATTCACG GCAGCCAACCGGTACAACTGCTGCTGGTTGGGGCGGAGGTCATGGTATCGCTGCTGTTTGTCCTCAGTTTCTGGTGGGCT TCAACGCGTATCCGCTATCTGTGGCAGGGGATTCTGATTTTCGGCGCTGCCCGCCATTGGGCGCTGGACCCTAATCTGGG CGGGCTGACCAGTACGCATGTGCTGAATACTGACCTGCTGTTAAACCTGACGGCCGTCGTTCTCGCTTTTGCGATCCTCT GTCTGGCGGGCGTACTCTGCGCGATGCTGCTGCGGCGTATTCGCGGCCTGTACTGGCCGTTAACGCTGATTCTGCTGGTG ATGATCTGGCTGCCGCTGAGCGGCAACCTGCTGTTGTTGCTGATGAAATTACAGGTTGTTCCGCTGGGAAAATCACTGCT GAGCTTCGTGGCGAAAGTCACAAATAACACGGCGCTGTATAACTGGGCGGGAGCCGCGCTGCTGCTGGCCCTGGCGCTGT GCTGGCTTCCGGCGCTGTTGCGGGCTTTTCGACAGACGCGGGAAACCGAAGAACCGATTGCTCACCGTCTGGCGCTGGCG CAGCGTCGCAACGCTTTGCGGCTGTGGTTGGTCACAATCGGCTGCGCGGTGGTCGTTATCGCAGGCCAACTGTGGTGGGA TAAAGTGGCCTCGCAGCCGCCGCAACTCTCTGAAGCCGTGCCCGTAACGCTGGGGAGCGATGGCATGGTGCGCCTGCCGG TTGAACAGCTTCGTGACGGTAAACTGCATCGTTTCGTCTGGGTGGCGGACGATGGCAAAGCGGTGCGCTTCTTCGTGATT AACCGCTATCCCGACAAGCTGCGTTTTGGCGTGGTGTTCGACGCCTGCCTGCTGTGCGGCGATCAGGGTTATGTCATGGA GGGCAATCAGGTTATCTGCGTCGCCTGCGGAGTGCATATTTTTATTCCGTCTATCGGCAAGGCCGGTGGCTGTAACCCGG TGCCGATTGAAAACTGGCACAATGATGAAAAAGAGCTGGTGATCCCCGGTAAAGAACTGGCGACAGGGGTGAACTACTTC TCGACGGTCATGACTATTAAAGTGACCGATCCGGTCGATGGTTCAACGTTGACCAATACCTCAGCCGATTACAAATACAG CTATGGCGGCAAGACCTGGTTCTTCTCGTCAGAGGCTAACTATGAACGCTTCCGTGAAACGCCGGAGCAGTTTGTTCCTG CCGACATGAGGGAGGAATAA
Upstream 100 bases:
>100_bases CGACTAACCAACGCGCCAGGAGGATTCCCCCTTCTGGCGCGTTGGTCAGACCGATCATATGCCCGTCGCTTAATTCAACC CGCCGTACAGAGTCGAAGTT
Downstream 100 bases:
>100_bases TCATGCTGTGGCGGATGTTACGACAATCCTGGGGGCGCAATTTACGCCGCAAAGTGCTGGCGATAATCACCGTTTTTCTG GCCTCCAGCCTGATCTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: YHS Domain Protein; YHS Domain-Containing Protein
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MSYFFVTTLQVFFCIALLSGVLWSRNDPPSLRPLTWTLLTGLIAGVLAGLFIHGSQPVQLLLVGAEVMVSLLFVLSFWWA STRIRYLWQGILIFGAARHWALDPNLGGLTSTHVLNTDLLLNLTAVVLAFAILCLAGVLCAMLLRRIRGLYWPLTLILLV MIWLPLSGNLLLLLMKLQVVPLGKSLLSFVAKVTNNTALYNWAGAALLLALALCWLPALLRAFRQTRETEEPIAHRLALA QRRNALRLWLVTIGCAVVVIAGQLWWDKVASQPPQLSEAVPVTLGSDGMVRLPVEQLRDGKLHRFVWVADDGKAVRFFVI NRYPDKLRFGVVFDACLLCGDQGYVMEGNQVICVACGVHIFIPSIGKAGGCNPVPIENWHNDEKELVIPGKELATGVNYF STVMTIKVTDPVDGSTLTNTSADYKYSYGGKTWFFSSEANYERFRETPEQFVPADMREE
Sequences:
>Translated_459_residues MSYFFVTTLQVFFCIALLSGVLWSRNDPPSLRPLTWTLLTGLIAGVLAGLFIHGSQPVQLLLVGAEVMVSLLFVLSFWWA STRIRYLWQGILIFGAARHWALDPNLGGLTSTHVLNTDLLLNLTAVVLAFAILCLAGVLCAMLLRRIRGLYWPLTLILLV MIWLPLSGNLLLLLMKLQVVPLGKSLLSFVAKVTNNTALYNWAGAALLLALALCWLPALLRAFRQTRETEEPIAHRLALA QRRNALRLWLVTIGCAVVVIAGQLWWDKVASQPPQLSEAVPVTLGSDGMVRLPVEQLRDGKLHRFVWVADDGKAVRFFVI NRYPDKLRFGVVFDACLLCGDQGYVMEGNQVICVACGVHIFIPSIGKAGGCNPVPIENWHNDEKELVIPGKELATGVNYF STVMTIKVTDPVDGSTLTNTSADYKYSYGGKTWFFSSEANYERFRETPEQFVPADMREE >Mature_458_residues SYFFVTTLQVFFCIALLSGVLWSRNDPPSLRPLTWTLLTGLIAGVLAGLFIHGSQPVQLLLVGAEVMVSLLFVLSFWWAS TRIRYLWQGILIFGAARHWALDPNLGGLTSTHVLNTDLLLNLTAVVLAFAILCLAGVLCAMLLRRIRGLYWPLTLILLVM IWLPLSGNLLLLLMKLQVVPLGKSLLSFVAKVTNNTALYNWAGAALLLALALCWLPALLRAFRQTRETEEPIAHRLALAQ RRNALRLWLVTIGCAVVVIAGQLWWDKVASQPPQLSEAVPVTLGSDGMVRLPVEQLRDGKLHRFVWVADDGKAVRFFVIN RYPDKLRFGVVFDACLLCGDQGYVMEGNQVICVACGVHIFIPSIGKAGGCNPVPIENWHNDEKELVIPGKELATGVNYFS TVMTIKVTDPVDGSTLTNTSADYKYSYGGKTWFFSSEANYERFRETPEQFVPADMREE
Specific function: Unknown
COG id: COG4393
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51006; Mature: 50875
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYFFVTTLQVFFCIALLSGVLWSRNDPPSLRPLTWTLLTGLIAGVLAGLFIHGSQPVQL CCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE LLVGAEVMVSLLFVLSFWWASTRIRYLWQGILIFGAARHWALDPNLGGLTSTHVLNTDLL EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCCCCHHEECHHHH LNLTAVVLAFAILCLAGVLCAMLLRRIRGLYWPLTLILLVMIWLPLSGNLLLLLMKLQVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC PLGKSLLSFVAKVTNNTALYNWAGAALLLALALCWLPALLRAFRQTRETEEPIAHRLALA CCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH QRRNALRLWLVTIGCAVVVIAGQLWWDKVASQPPQLSEAVPVTLGSDGMVRLPVEQLRDG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEECCHHHCCCC KLHRFVWVADDGKAVRFFVINRYPDKLRFGVVFDACLLCGDQGYVMEGNQVICVACGVHI CEEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCEEEEEECCEEE FIPSIGKAGGCNPVPIENWHNDEKELVIPGKELATGVNYFSTVMTIKVTDPVDGSTLTNT EECCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHEEEEEEEEECCCCCCCCCCC SADYKYSYGGKTWFFSSEANYERFRETPEQFVPADMREE CCCEEEECCCEEEEECCCCCHHHHHCCHHHHCCCCCCCC >Mature Secondary Structure SYFFVTTLQVFFCIALLSGVLWSRNDPPSLRPLTWTLLTGLIAGVLAGLFIHGSQPVQL CEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE LLVGAEVMVSLLFVLSFWWASTRIRYLWQGILIFGAARHWALDPNLGGLTSTHVLNTDLL EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCCCCHHEECHHHH LNLTAVVLAFAILCLAGVLCAMLLRRIRGLYWPLTLILLVMIWLPLSGNLLLLLMKLQVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC PLGKSLLSFVAKVTNNTALYNWAGAALLLALALCWLPALLRAFRQTRETEEPIAHRLALA CCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH QRRNALRLWLVTIGCAVVVIAGQLWWDKVASQPPQLSEAVPVTLGSDGMVRLPVEQLRDG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEECCHHHCCCC KLHRFVWVADDGKAVRFFVINRYPDKLRFGVVFDACLLCGDQGYVMEGNQVICVACGVHI CEEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCEEEEEECCEEE FIPSIGKAGGCNPVPIENWHNDEKELVIPGKELATGVNYFSTVMTIKVTDPVDGSTLTNT EECCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHEEEEEEEEECCCCCCCCCCC SADYKYSYGGKTWFFSSEANYERFRETPEQFVPADMREE CCCEEEECCCEEEEECCCCCHHHHHCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA