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The map label for this gene is int

Identifier: 218692796

GI number: 218692796

Start: 1321

End: 2061

Strand: Reverse

Name: int

Synonym: p1ECUMN_0002

Alternate gene names: 218692796

Gene position: 2061-1321 (Counterclockwise)

Preceding gene: 218692798

Following gene: NA

Centisome position: 1.69

GC content: 57.22

Gene sequence:

>741_bases
ATGAACAATGTCATTCCCCTGCAGAATTCACCAGAACGCGTCTCCCTGTTACCCATTGCGCCGGGGGTGGATTTTGCAAC
AGCGCTCTCCCTGAGAAGAATGGCCACTTCCACGGGGGCCACACCGGCCTACCTGCTGGCCCCGGAAGTGAGTGCCCTTC
TCTTCTATATGCCGGATCAGCGTCACCATATGCTGTTCGCCACCCTCTGGAATACCGGAATGCGTATTGGCGAAGCCCGG
ATGCTGACGCCGGAATCATTTGACCTGAATGGAGTAAGACCGTTTGTGCGGATCCTGTCCGAAAAAGTGCGTGCGCGACG
CGGACGCCCGCCAAAAGATGAAGTGCGACTGGTGCCGCTGACAGATATAAGCTATGTCAGGCAGATGGAAAGCTGGATGA
TCACCACCCGGCCCCGTCGTCGTGAACCATTATGGGCCGTGACCGACGAAACCATGCGCAACTGGCTGAAGCAGGCTGTC
AGACGGGCCGAAGCTGACGGCGTGCATTTTTCGATTCCGGTCACACCACATACCTTCCGGCACAGCTATATCATGCACAT
GCTCTATCACCGCCAGCCCCGGAAAGTCATCCAGGCACTGGCTGGTCACAGGGATCCACGTTCGATGGAGGTTTATACCA
GAGTTTTTGCGCTGGATATGGCTGCCACGCTGGCAGTGCCTTTCACAGGTGACGGGCGCGATGCTGCAGAGATCCTGCGT
ACACTGCCTCCCCTGAAGTGA

Upstream 100 bases:

>100_bases
GGATCCGCGCGCTGCGATTTATTGTCGTGGAAGGATCCGGGCGTTCAGGTCAGAATACCTGTATCCATAAACAGTGCGTG
TGCTACGTGAAAAATAACTC

Downstream 100 bases:

>100_bases
CAGCATACGCTCTTCCTTATATAAGCGGAGGTAAGCAGAACAGGCATAACATAAGCTATAGCAGGTAGATAAACTGTAGT
GAGTAAGCCGTGTTTTATGT

Product: site-specific recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MNNVIPLQNSPERVSLLPIAPGVDFATALSLRRMATSTGATPAYLLAPEVSALLFYMPDQRHHMLFATLWNTGMRIGEAR
MLTPESFDLNGVRPFVRILSEKVRARRGRPPKDEVRLVPLTDISYVRQMESWMITTRPRRREPLWAVTDETMRNWLKQAV
RRAEADGVHFSIPVTPHTFRHSYIMHMLYHRQPRKVIQALAGHRDPRSMEVYTRVFALDMAATLAVPFTGDGRDAAEILR
TLPPLK

Sequences:

>Translated_246_residues
MNNVIPLQNSPERVSLLPIAPGVDFATALSLRRMATSTGATPAYLLAPEVSALLFYMPDQRHHMLFATLWNTGMRIGEAR
MLTPESFDLNGVRPFVRILSEKVRARRGRPPKDEVRLVPLTDISYVRQMESWMITTRPRRREPLWAVTDETMRNWLKQAV
RRAEADGVHFSIPVTPHTFRHSYIMHMLYHRQPRKVIQALAGHRDPRSMEVYTRVFALDMAATLAVPFTGDGRDAAEILR
TLPPLK
>Mature_246_residues
MNNVIPLQNSPERVSLLPIAPGVDFATALSLRRMATSTGATPAYLLAPEVSALLFYMPDQRHHMLFATLWNTGMRIGEAR
MLTPESFDLNGVRPFVRILSEKVRARRGRPPKDEVRLVPLTDISYVRQMESWMITTRPRRREPLWAVTDETMRNWLKQAV
RRAEADGVHFSIPVTPHTFRHSYIMHMLYHRQPRKVIQALAGHRDPRSMEVYTRVFALDMAATLAVPFTGDGRDAAEILR
TLPPLK

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR016423 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 28163; Mature: 28163

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNVIPLQNSPERVSLLPIAPGVDFATALSLRRMATSTGATPAYLLAPEVSALLFYMPDQ
CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHEEEEECCCC
RHHMLFATLWNTGMRIGEARMLTPESFDLNGVRPFVRILSEKVRARRGRPPKDEVRLVPL
CCCEEHEEHHHCCCEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEEEE
TDISYVRQMESWMITTRPRRREPLWAVTDETMRNWLKQAVRRAEADGVHFSIPVTPHTFR
CCHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH
HSYIMHMLYHRQPRKVIQALAGHRDPRSMEVYTRVFALDMAATLAVPFTGDGRDAAEILR
HHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHH
TLPPLK
HCCCCC
>Mature Secondary Structure
MNNVIPLQNSPERVSLLPIAPGVDFATALSLRRMATSTGATPAYLLAPEVSALLFYMPDQ
CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHEEEEECCCC
RHHMLFATLWNTGMRIGEARMLTPESFDLNGVRPFVRILSEKVRARRGRPPKDEVRLVPL
CCCEEHEEHHHCCCEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEEEE
TDISYVRQMESWMITTRPRRREPLWAVTDETMRNWLKQAVRRAEADGVHFSIPVTPHTFR
CCHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH
HSYIMHMLYHRQPRKVIQALAGHRDPRSMEVYTRVFALDMAATLAVPFTGDGRDAAEILR
HHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHH
TLPPLK
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8002584 [H]