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The map label for this gene is ykgE [H]

Identifier: 218692555

GI number: 218692555

Start: 4959890

End: 4960609

Strand: Reverse

Name: ykgE [H]

Synonym: ECED1_5017

Alternate gene names: 218692555

Gene position: 4960609-4959890 (Counterclockwise)

Preceding gene: 218692556

Following gene: 218692554

Centisome position: 95.22

GC content: 47.92

Gene sequence:

>720_bases
GTGAATGTTAACTTTTTCGTCACCTGCATTGGTGATGCGTTTAAATCCCGGATGGCACAAAAGAGTGTGCTGTTACTGGA
GCAATTGGGTTGCAATGTCCATTTCCCCGAAAAGCAGGGATGTTGTGGTCAGCCAGCGATAAATGGCGGTTATGTTCGTG
ATGCCATCCCAGGCATGAAAAATCTCATATCTTCGCTGGAAGAGAATGACTGGCCGGTAGTATCTCCTGCCGGGTCATGC
ACTTACACGATAAAAAATTACGCTCGCTATCTCAGTGAAGAACCTGAGTGGGCAGCACGAGCTGAAAAAGTGGCTGAACG
CCTGCATGATTTGACATCATTTATAGTAAATCATCTTGGCATCACAGATGTTGGGGCAAAACTCAATGGTCGCGCTGTGT
ACCATCCCTCCTGCAGCCTTTCCCGTAAACTGGGTGTAACCAGAGAGCCGCTTTTGCTACTTGAGAATGTACAGGGGCTT
GAGCTACTGCCGTTTCACGCTCAGGAAACGTGCTGCGGGTTTGGCGGCACATTCTCTGTAAAAATGGCGGAGATCTCTGG
TGAAATGGTGAAAGAGAAAGTTGGGCATATTATGGATGTTAAACCTGATTTTCTTATCGGGGCTGACGCCAGTTGTCTGC
TAAACATCGGCGGTCGGCTTAACCGTGAAGGGCATCCTGTAAAAGTGATGCATATTGCTGAAGTCCTGATGCACAGATGA

Upstream 100 bases:

>100_bases
GTTATTCTTGGACTGAAAGTAGGCCTTGTCTACCACCTGTTCATGGCCTGAGAAAAAACAACAAAAGGACGTGGAATATT
AATCAACAGGAGAAATTTCT

Downstream 100 bases:

>100_bases
GGTAAACAGAATGTCTTTGAAAACAAGTGATATCAGGTTTAAAGAGCGTATCCGTATTCAGATTCAGGACCCGATCATGC
GAAAAGCTGTGGCTAACGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MNVNFFVTCIGDAFKSRMAQKSVLLLEQLGCNVHFPEKQGCCGQPAINGGYVRDAIPGMKNLISSLEENDWPVVSPAGSC
TYTIKNYARYLSEEPEWAARAEKVAERLHDLTSFIVNHLGITDVGAKLNGRAVYHPSCSLSRKLGVTREPLLLLENVQGL
ELLPFHAQETCCGFGGTFSVKMAEISGEMVKEKVGHIMDVKPDFLIGADASCLLNIGGRLNREGHPVKVMHIAEVLMHR

Sequences:

>Translated_239_residues
MNVNFFVTCIGDAFKSRMAQKSVLLLEQLGCNVHFPEKQGCCGQPAINGGYVRDAIPGMKNLISSLEENDWPVVSPAGSC
TYTIKNYARYLSEEPEWAARAEKVAERLHDLTSFIVNHLGITDVGAKLNGRAVYHPSCSLSRKLGVTREPLLLLENVQGL
ELLPFHAQETCCGFGGTFSVKMAEISGEMVKEKVGHIMDVKPDFLIGADASCLLNIGGRLNREGHPVKVMHIAEVLMHR
>Mature_239_residues
MNVNFFVTCIGDAFKSRMAQKSVLLLEQLGCNVHFPEKQGCCGQPAINGGYVRDAIPGMKNLISSLEENDWPVVSPAGSC
TYTIKNYARYLSEEPEWAARAEKVAERLHDLTSFIVNHLGITDVGAKLNGRAVYHPSCSLSRKLGVTREPLLLLENVQGL
ELLPFHAQETCCGFGGTFSVKMAEISGEMVKEKVGHIMDVKPDFLIGADASCLLNIGGRLNREGHPVKVMHIAEVLMHR

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lutA/ykgE family [H]

Homologues:

Organism=Escherichia coli, GI1786497, Length=239, Percent_Identity=76.9874476987448, Blast_Score=399, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 26240; Mature: 26240

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVNFFVTCIGDAFKSRMAQKSVLLLEQLGCNVHFPEKQGCCGQPAINGGYVRDAIPGMK
CCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
NLISSLEENDWPVVSPAGSCTYTIKNYARYLSEEPEWAARAEKVAERLHDLTSFIVNHLG
HHHHHHHCCCCCEECCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
ITDVGAKLNGRAVYHPSCSLSRKLGVTREPLLLLENVQGLELLPFHAQETCCGFGGTFSV
CCCCCCCCCCCEEECCCCCHHHHCCCCCCCHHHCCCCCCCEEECCCCHHHHCCCCCEEEE
KMAEISGEMVKEKVGHIMDVKPDFLIGADASCLLNIGGRLNREGHPVKVMHIAEVLMHR
EHHHHHHHHHHHHHHHEECCCCCEEECCCCHHEEECCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNVNFFVTCIGDAFKSRMAQKSVLLLEQLGCNVHFPEKQGCCGQPAINGGYVRDAIPGMK
CCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
NLISSLEENDWPVVSPAGSCTYTIKNYARYLSEEPEWAARAEKVAERLHDLTSFIVNHLG
HHHHHHHCCCCCEECCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
ITDVGAKLNGRAVYHPSCSLSRKLGVTREPLLLLENVQGLELLPFHAQETCCGFGGTFSV
CCCCCCCCCCCEEECCCCCHHHHCCCCCCCHHHCCCCCCCEEECCCCHHHHCCCCCEEEE
KMAEISGEMVKEKVGHIMDVKPDFLIGADASCLLNIGGRLNREGHPVKVMHIAEVLMHR
EHHHHHHHHHHHHHHHEECCCCCEEECCCCHHEEECCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]