Click here to switch to the map view.

The map label for this gene is phnA [H]

Identifier: 218692404

GI number: 218692404

Start: 4803171

End: 4803653

Strand: Reverse

Name: phnA [H]

Synonym: ECED1_4842

Alternate gene names: 218692404

Gene position: 4803653-4803171 (Counterclockwise)

Preceding gene: 218692408

Following gene: 218692403

Centisome position: 92.21

GC content: 45.55

Gene sequence:

>483_bases
TTGCGTTTCCTTTCAAATGAAAACGATCGTCATCTAAAATCAGCAGTACCCCCGACAAACTCAGGGATTTTGTGTATAAT
TGCGGCCTTTTTCGGCAATCTGCCGTTTTTTGGCGCTTTTGCCCTGCTGACTTTTGAGGAAATCCACATGTCATTACCAC
ACTGCCCAAAATGCAACTCCGAATACACCTACGAAGATAACGGCATGTACATCTGCCCGGAATGTGCCTACGAATGGAAC
GACGCAGAACCTGCACAGGAAAGCGACGAGCTGATCGTTAAAGATGCTAACGGCAATCTGCTGGCTGACGGCGACAGCGT
TACCATCATTAAAGATCTGAAAGTGAAAGGTAGCTCTTCGATGCTGAAAATTGGCACCAAAGTAAAAAACATCCGCCTGG
TTGAAGGCGACCATAACATCGATTGCAAAATCGACGGTTTTGGTCCGATGAAACTGAAGTCTGAGTTTGTGAAAAAGAAC
TGA

Upstream 100 bases:

>100_bases
ACGTCAGAAAGATAAAAACATCATGTGAATTAAAAAAAGAACGAGTAGAGCATTAACCTTATCTTAAATAATAAATGGAG
GCAAAACGATTATTTTCTTT

Downstream 100 bases:

>100_bases
TTGTATTGTGATCGGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAACGGTGGCGACTGCCTGATGCGACGCTGACC
GCGTCTTATCAGGCTTCCCT

Product: putative alkylphosphonate uptake protein in phosphonate metabolism

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MRFLSNENDRHLKSAVPPTNSGILCIIAAFFGNLPFFGAFALLTFEEIHMSLPHCPKCNSEYTYEDNGMYICPECAYEWN
DAEPAQESDELIVKDANGNLLADGDSVTIIKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMKLKSEFVKKN

Sequences:

>Translated_160_residues
MRFLSNENDRHLKSAVPPTNSGILCIIAAFFGNLPFFGAFALLTFEEIHMSLPHCPKCNSEYTYEDNGMYICPECAYEWN
DAEPAQESDELIVKDANGNLLADGDSVTIIKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMKLKSEFVKKN
>Mature_160_residues
MRFLSNENDRHLKSAVPPTNSGILCIIAAFFGNLPFFGAFALLTFEEIHMSLPHCPKCNSEYTYEDNGMYICPECAYEWN
DAEPAQESDELIVKDANGNLLADGDSVTIIKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMKLKSEFVKKN

Specific function: Unknown

COG id: COG2824

COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790547, Length=111, Percent_Identity=100, Blast_Score=230, Evalue=3e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004624
- InterPro:   IPR013988
- InterPro:   IPR013987 [H]

Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]

EC number: NA

Molecular weight: Translated: 17796; Mature: 17796

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLSNENDRHLKSAVPPTNSGILCIIAAFFGNLPFFGAFALLTFEEIHMSLPHCPKCNS
CCCCCCCCCCHHHHCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
EYTYEDNGMYICPECAYEWNDAEPAQESDELIVKDANGNLLADGDSVTIIKDLKVKGSSS
CCEEECCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCEEEEEEEEECCCCC
MLKIGTKVKNIRLVEGDHNIDCKIDGFGPMKLKSEFVKKN
EEEECCEEEEEEEEECCCCEEEEECCCCCHHHHHHHHCCC
>Mature Secondary Structure
MRFLSNENDRHLKSAVPPTNSGILCIIAAFFGNLPFFGAFALLTFEEIHMSLPHCPKCNS
CCCCCCCCCCHHHHCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
EYTYEDNGMYICPECAYEWNDAEPAQESDELIVKDANGNLLADGDSVTIIKDLKVKGSSS
CCEEECCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCEEEEEEEEECCCCC
MLKIGTKVKNIRLVEGDHNIDCKIDGFGPMKLKSEFVKKN
EEEECCEEEEEEEEECCCCEEEEECCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]