Click here to switch to the map view.

The map label for this gene is yjcS [H]

Identifier: 218692380

GI number: 218692380

Start: 4782044

End: 4784005

Strand: Reverse

Name: yjcS [H]

Synonym: ECED1_4817

Alternate gene names: 218692380

Gene position: 4784005-4782044 (Counterclockwise)

Preceding gene: 218692381

Following gene: 218692379

Centisome position: 91.83

GC content: 52.29

Gene sequence:

>1962_bases
ATGGAGATTTATATGAATAACTCTCGGTTATTCCGTTTGAGCAGGATTGTTATTGCGTTCACTGCCGCCAGCGGCATGAT
GATAAATACCGCTTACGCAACAGATGAAGCGAAAGCCGCCACTCAATATACCCAACAGGTTAATCAGAATTACGCCAAAT
CATTACCGTTTAGCGATCGTCAGGATTTTGACGATGCCCAGCGTGGATTTATCGCTCCGCTGCTGGATGAAGGTATTCTG
CGTGATGCGAACGGTAAAATTTACTACCGCGCGAATGATTACAAATTTGATATTAATGCCGCTGCGCCGGAAACCGTAAA
CCCCAGCCTGTGGCGTCAGTCGCAGATCAACGGCATTTCAGGCCTGTTCAAAGTCACCGATAAAATGTATCAGGTGCGCG
GCCAGGATATCTCTAACATTACGTTCGTTGAGGGCGAGAAAGGCATTATTGTTATTGACCCACTGGTGACGCCACCTGCC
GCAAAAGCCGCACTTGACCTTTACTTCCAGCATCGCCCGCAAAAACCCATTATTGCCGTTATCTATACCCACAGCCACGC
CGACCACTATGGCGGCGTGAAAGGCATCATCTCTGAAGCCGATGTTAAATCCGGAAAAGTTCAGGTGATTGCTCCAGCTG
GCTTTATGGACGAAGCCATCAGCGAAAACGTGCTGGCGGGTAACATCATGAGCCGCCGTGCGCTCTACTCTTACGGTCTG
TTACTGCCGCACAACGCGCAAGGCAATGTGGGTAATGGCCTTGGCGTGACGCTGGCAACGGGCGACCCGAGCATTATTGC
ACCGACTAAAACTATCGTGAGAACTGGCGAGAAGATGATTATCGACGGCCTGGAGTTTGACTTCCTGATGACCCCAGGTA
GCGAAGCGCCAGCGGAAATGCACTTCTATATTCCGGCCCTGAAAGCCCTGTGTACCGCCGAGAATGCCACGCATACCCTG
CACAACTTCTACACCCTGCGCGGCGCGAAAACCCGCGACACCAGCAAGTGGACCGAGTATCTGAACGAAACATTGGATAT
GTGGGGTAACGACGCGGAAGTACTGTTTATGCCGCACACCTGGCCGGTTTGGGGCAATAAGCATATCAATGATTATATTG
GTAAATATCGCGATACTATCAAGTACATTCACGACCAGACCCTGCACCTGGCGAACCAGGGCTACACCATGAATGAAATC
GGCGACATGATTAAGCTGCCGCCTGCGCTTGCCAATAACTGGGCCAGCCGCGGCTATTACGGTTCTGTCAGCCACAACGC
CCGCGCGGTATATAACTTCTATCTTGGCTATTACGACGGTAACCCGGCTAACCTGCATCCGTATGGTCAGGTGGAGATGG
GTAAACGTTACGTGCAGGCGCTGGGCGGTTCTGCCCGCGTCATCAACCTGGCGCAAGAAGCGAACAAGCAAGGTGATTAT
CGCTGGTCGGCAGAACTGCTGAAACAGGTGATTGCCGCCAACCCGGGTGACCAGGTCGCGAAGAATCTGCAAGCGAATAA
CTTTGAACAGCTGGGCTATCAGGCCGAGTCCGCCACATGGCGCGATTTCTACCTGACCGGCGCGAAAGAGCTGCGCGAAG
GGGGGCATAAGTTCAGCCACGGCACCACCGGTTCCCCGGACACCATTCGTGGGATGTCGGTCGAAATGCTGTTCGACTTT
ATGTCCGTTCGCCTCGATAGCGCGAAAGCCGCGGGTAAAAATATCAGCCTGAACTTCAATATGAGCAACGGCGATAACCT
CAACCTGACGCTGAACGATAGCGTGCTTAACTACCGTAAAACACTGCAACCGCAAGCTGACGCCTCTTTCTACATCAGCC
GTGAAGATCTGCACGCCGTGCTGACCGGACAGGCAAAAAATGGCCGATCTGGTGAAAGCGAAGAAAGCCAAAATTATTGG
CAATGGCGCGAAACTGGAAGAAATTATCGCCTGTCTGGATAA

Upstream 100 bases:

>100_bases
CACACTTCCACTTATTAAAGTCGCAATTTCAGAATTATGATAACGCCAGCTTTAAATGACGTATTTTGCATGGATTACAT
ATTTACGACATAAATGATAA

Downstream 100 bases:

>100_bases
TTTCGATTTGTGGGTGAATATCGTAACCCCAAATTAATGTCACTCGCTTTTGGGGGCGCTGAAGCCCCCAAAAGCATTTA
TTTTAAAAATATATACAGCA

Product: putative alkyl sulfatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 653; Mature: 653

Protein sequence:

>653_residues
MEIYMNNSRLFRLSRIVIAFTAASGMMINTAYATDEAKAATQYTQQVNQNYAKSLPFSDRQDFDDAQRGFIAPLLDEGIL
RDANGKIYYRANDYKFDINAAAPETVNPSLWRQSQINGISGLFKVTDKMYQVRGQDISNITFVEGEKGIIVIDPLVTPPA
AKAALDLYFQHRPQKPIIAVIYTHSHADHYGGVKGIISEADVKSGKVQVIAPAGFMDEAISENVLAGNIMSRRALYSYGL
LLPHNAQGNVGNGLGVTLATGDPSIIAPTKTIVRTGEKMIIDGLEFDFLMTPGSEAPAEMHFYIPALKALCTAENATHTL
HNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVLFMPHTWPVWGNKHINDYIGKYRDTIKYIHDQTLHLANQGYTMNEI
GDMIKLPPALANNWASRGYYGSVSHNARAVYNFYLGYYDGNPANLHPYGQVEMGKRYVQALGGSARVINLAQEANKQGDY
RWSAELLKQVIAANPGDQVAKNLQANNFEQLGYQAESATWRDFYLTGAKELREGGHKFSHGTTGSPDTIRGMSVEMLFDF
MSVRLDSAKAAGKNISLNFNMSNGDNLNLTLNDSVLNYRKTLQPQADASFYISREDLHAVLTGQAKNGRSGESEESQNYW
QWRETGRNYRLSG

Sequences:

>Translated_653_residues
MEIYMNNSRLFRLSRIVIAFTAASGMMINTAYATDEAKAATQYTQQVNQNYAKSLPFSDRQDFDDAQRGFIAPLLDEGIL
RDANGKIYYRANDYKFDINAAAPETVNPSLWRQSQINGISGLFKVTDKMYQVRGQDISNITFVEGEKGIIVIDPLVTPPA
AKAALDLYFQHRPQKPIIAVIYTHSHADHYGGVKGIISEADVKSGKVQVIAPAGFMDEAISENVLAGNIMSRRALYSYGL
LLPHNAQGNVGNGLGVTLATGDPSIIAPTKTIVRTGEKMIIDGLEFDFLMTPGSEAPAEMHFYIPALKALCTAENATHTL
HNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVLFMPHTWPVWGNKHINDYIGKYRDTIKYIHDQTLHLANQGYTMNEI
GDMIKLPPALANNWASRGYYGSVSHNARAVYNFYLGYYDGNPANLHPYGQVEMGKRYVQALGGSARVINLAQEANKQGDY
RWSAELLKQVIAANPGDQVAKNLQANNFEQLGYQAESATWRDFYLTGAKELREGGHKFSHGTTGSPDTIRGMSVEMLFDF
MSVRLDSAKAAGKNISLNFNMSNGDNLNLTLNDSVLNYRKTLQPQADASFYISREDLHAVLTGQAKNGRSGESEESQNYW
QWRETGRNYRLSG
>Mature_653_residues
MEIYMNNSRLFRLSRIVIAFTAASGMMINTAYATDEAKAATQYTQQVNQNYAKSLPFSDRQDFDDAQRGFIAPLLDEGIL
RDANGKIYYRANDYKFDINAAAPETVNPSLWRQSQINGISGLFKVTDKMYQVRGQDISNITFVEGEKGIIVIDPLVTPPA
AKAALDLYFQHRPQKPIIAVIYTHSHADHYGGVKGIISEADVKSGKVQVIAPAGFMDEAISENVLAGNIMSRRALYSYGL
LLPHNAQGNVGNGLGVTLATGDPSIIAPTKTIVRTGEKMIIDGLEFDFLMTPGSEAPAEMHFYIPALKALCTAENATHTL
HNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVLFMPHTWPVWGNKHINDYIGKYRDTIKYIHDQTLHLANQGYTMNEI
GDMIKLPPALANNWASRGYYGSVSHNARAVYNFYLGYYDGNPANLHPYGQVEMGKRYVQALGGSARVINLAQEANKQGDY
RWSAELLKQVIAANPGDQVAKNLQANNFEQLGYQAESATWRDFYLTGAKELREGGHKFSHGTTGSPDTIRGMSVEMLFDF
MSVRLDSAKAAGKNISLNFNMSNGDNLNLTLNDSVLNYRKTLQPQADASFYISREDLHAVLTGQAKNGRSGESEESQNYW
QWRETGRNYRLSG

Specific function: Unknown

COG id: COG2015

COG function: function code Q; Alkyl sulfatase and related hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082368, Length=622, Percent_Identity=98.0707395498392, Blast_Score=1272, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6324409, Length=589, Percent_Identity=46.1799660441426, Blast_Score=559, Evalue=1e-160,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR003033 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 72751; Mature: 72751

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIYMNNSRLFRLSRIVIAFTAASGMMINTAYATDEAKAATQYTQQVNQNYAKSLPFSDR
CEEEECCCEEEEEEEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCC
QDFDDAQRGFIAPLLDEGILRDANGKIYYRANDYKFDINAAAPETVNPSLWRQSQINGIS
CCCCHHHCCCCCHHHHCCCEECCCCEEEEEECCEEEEECCCCCCCCCHHHHHHHHCCCHH
GLFKVTDKMYQVRGQDISNITFVEGEKGIIVIDPLVTPPAAKAALDLYFQHRPQKPIIAV
HHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEE
IYTHSHADHYGGVKGIISEADVKSGKVQVIAPAGFMDEAISENVLAGNIMSRRALYSYGL
EEECCCCCCCCCHHHHHCCCCCCCCCEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHCCE
LLPHNAQGNVGNGLGVTLATGDPSIIAPTKTIVRTGEKMIIDGLEFDFLMTPGSEAPAEM
EEECCCCCCCCCCEEEEEECCCCCEECCCHHHHHCCCEEEEECCCEEEEECCCCCCCCEE
HFYIPALKALCTAENATHTLHNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVLFMPHT
EEHHHHHHHHHHCCCCHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC
WPVWGNKHINDYIGKYRDTIKYIHDQTLHLANQGYTMNEIGDMIKLPPALANNWASRGYY
CCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCHHHHCCCCCCCCC
GSVSHNARAVYNFYLGYYDGNPANLHPYGQVEMGKRYVQALGGSARVINLAQEANKQGDY
CCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHCCCCCCC
RWSAELLKQVIAANPGDQVAKNLQANNFEQLGYQAESATWRDFYLTGAKELREGGHKFSH
CHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHCEECCCCCEEEEEECCHHHHHHCCCCCCC
GTTGSPDTIRGMSVEMLFDFMSVRLDSAKAAGKNISLNFNMSNGDNLNLTLNDSVLNYRK
CCCCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCEEEEEEECCCCCEEEEEECCHHHHHHH
TLQPQADASFYISREDLHAVLTGQAKNGRSGESEESQNYWQWRETGRNYRLSG
HCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEECCC
>Mature Secondary Structure
MEIYMNNSRLFRLSRIVIAFTAASGMMINTAYATDEAKAATQYTQQVNQNYAKSLPFSDR
CEEEECCCEEEEEEEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCC
QDFDDAQRGFIAPLLDEGILRDANGKIYYRANDYKFDINAAAPETVNPSLWRQSQINGIS
CCCCHHHCCCCCHHHHCCCEECCCCEEEEEECCEEEEECCCCCCCCCHHHHHHHHCCCHH
GLFKVTDKMYQVRGQDISNITFVEGEKGIIVIDPLVTPPAAKAALDLYFQHRPQKPIIAV
HHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEE
IYTHSHADHYGGVKGIISEADVKSGKVQVIAPAGFMDEAISENVLAGNIMSRRALYSYGL
EEECCCCCCCCCHHHHHCCCCCCCCCEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHCCE
LLPHNAQGNVGNGLGVTLATGDPSIIAPTKTIVRTGEKMIIDGLEFDFLMTPGSEAPAEM
EEECCCCCCCCCCEEEEEECCCCCEECCCHHHHHCCCEEEEECCCEEEEECCCCCCCCEE
HFYIPALKALCTAENATHTLHNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVLFMPHT
EEHHHHHHHHHHCCCCHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC
WPVWGNKHINDYIGKYRDTIKYIHDQTLHLANQGYTMNEIGDMIKLPPALANNWASRGYY
CCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCHHHHCCCCCCCCC
GSVSHNARAVYNFYLGYYDGNPANLHPYGQVEMGKRYVQALGGSARVINLAQEANKQGDY
CCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHCCCCCCC
RWSAELLKQVIAANPGDQVAKNLQANNFEQLGYQAESATWRDFYLTGAKELREGGHKFSH
CHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHCEECCCCCEEEEEECCHHHHHHCCCCCCC
GTTGSPDTIRGMSVEMLFDFMSVRLDSAKAAGKNISLNFNMSNGDNLNLTLNDSVLNYRK
CCCCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCEEEEEEECCCCCEEEEEECCHHHHHHH
TLQPQADASFYISREDLHAVLTGQAKNGRSGESEESQNYWQWRETGRNYRLSG
HCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]