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The map label for this gene is yicO [H]

Identifier: 218691956

GI number: 218691956

Start: 4283023

End: 4284357

Strand: Reverse

Name: yicO [H]

Synonym: ECED1_4359

Alternate gene names: 218691956

Gene position: 4284357-4283023 (Counterclockwise)

Preceding gene: 218691958

Following gene: 218691955

Centisome position: 82.24

GC content: 48.24

Gene sequence:

>1335_bases
ATGAATAATGACAATACCGATTACGTGAGTAATGAATCAGGGACGCTTTCGCGATTATTTAAACTACCTCAGCATGGGAC
CACCGTCCGCACAGAATTGATTGCGGGGATGACCACTTTTTTAACCATGGTGTACATCGTTTTTGTGAACCCGCAAATCC
TCGGCGCGGCACAAATGGACCCGAAAGTGGTGTTTGTTACCACCTGTTTGATTGCCGGTATCGGCAGTATTGCGATGGGG
GTATTTGCTAACTTACCCGTGGCACTGGCTCCGGCAATGGGCCTGAACGCCTTCTTTGCCTTCGTGGTCGTGGGGGCGAT
GGGTATCTCCTGGCAGACCGGGATGGGCGCGATATTCTGGGGCGCAGTTGGGCTATTTTTGCTCACGCTGTTTCGTATCC
GGTACTGGATGATCTCCAACATTCCATTTAGTTTACGTATTGGTATCACCAGCGGAATCGGATTATTTATCGCCTTAATG
GGATTAAAAAATACTGGCGTTATTGTCGCCAATAAAGACACCCTGGTGATGATTGGCGATTTAAGTTCTCACGGCGTGTT
GTTAGGTATTTTAGGGTTTTTTATTATAACCGTGTTGTCATCACGTCATTTTCATGCCGCGGTGCTTGTTTCTATTGTGG
TGACGTCTTGCTGTGGATTGTTTTTCGGAGATGTTCATTTTAGCGGCGTCTATTCCATTCCGCCTGATATTAGCGGCGTC
ATTGGTGAAGTGGATTTGAGCGGTGCGTTATCACTTGAACTCGCCGGTATCATTTTCTCCTTTATGCTGATCAACTTATT
TGATTCATCAGGGACATTAATTGGTGTGACTGATAAAGCTGGCTTAATAGATAGTAACGGTAAATTCCCCAATATGAATA
AGGCGCTGTGTGTTGATAGCGTCAGTTCGGTGGCGGGTGCGTTTATCGGTACCTCGTCTGTTACCGCCTGTATTGAAAGT
ACTTCAGGTGTGGCTGTCGGTGGTCGCACGGGTCTGACGGCTGTCGTAGTCGGCGTTATGTTCCTGTTAGTTATGTTCTT
CTCACCGCTGGTGGCGATGGTTCCTCCTTACGCAACCGCCGGAGCGTTAATCTTTGTTGGCGTGCTGATGACTTCAAGCT
TGGCGCGCGTTAACTGGGATGATTTTACCGAATCGGTGCCTGCGTTTATTACCACGGTGATGATGCCCTTTACTTTCTCG
ATCACCGAAGGGATTGCACTAGGCTTTATGTCGTACTGCATCATGAAAGTGTGCACCGGGCGCTGGCGCGATCTGAACCT
GTGCGTGGTGGTGGTCGCAACTCTGTTTGCACTGAAGATTATTCTGGTGGATTAG

Upstream 100 bases:

>100_bases
TCCATTAATGTGCAATTGAAATGTGATAATTATCACTGAACCGTTGTTGTCATTTGTTTTACAAAAGCAAGGGATTAAAT
CTCCTCCAATGGACAAAAAA

Downstream 100 bases:

>100_bases
TAACTGGCGAGGGTTTCCAGATATCATGAGTTCTGATTACGCAGGAGAACTCATGATCTGGATAATGCTCGCCACGCTGG
CGGTAGTGTTTGTGGTTGGT

Product: putative xanthine/uracil permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELIAGMTTFLTMVYIVFVNPQILGAAQMDPKVVFVTTCLIAGIGSIAMG
VFANLPVALAPAMGLNAFFAFVVVGAMGISWQTGMGAIFWGAVGLFLLTLFRIRYWMISNIPFSLRIGITSGIGLFIALM
GLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVVTSCCGLFFGDVHFSGVYSIPPDISGV
IGEVDLSGALSLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDSNGKFPNMNKALCVDSVSSVAGAFIGTSSVTACIES
TSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAMVPPYATAGALIFVGVLMTSSLARVNWDDFTESVPAFITTVMMPFTFS
ITEGIALGFMSYCIMKVCTGRWRDLNLCVVVVATLFALKIILVD

Sequences:

>Translated_444_residues
MNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELIAGMTTFLTMVYIVFVNPQILGAAQMDPKVVFVTTCLIAGIGSIAMG
VFANLPVALAPAMGLNAFFAFVVVGAMGISWQTGMGAIFWGAVGLFLLTLFRIRYWMISNIPFSLRIGITSGIGLFIALM
GLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVVTSCCGLFFGDVHFSGVYSIPPDISGV
IGEVDLSGALSLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDSNGKFPNMNKALCVDSVSSVAGAFIGTSSVTACIES
TSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAMVPPYATAGALIFVGVLMTSSLARVNWDDFTESVPAFITTVMMPFTFS
ITEGIALGFMSYCIMKVCTGRWRDLNLCVVVVATLFALKIILVD
>Mature_444_residues
MNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELIAGMTTFLTMVYIVFVNPQILGAAQMDPKVVFVTTCLIAGIGSIAMG
VFANLPVALAPAMGLNAFFAFVVVGAMGISWQTGMGAIFWGAVGLFLLTLFRIRYWMISNIPFSLRIGITSGIGLFIALM
GLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVVTSCCGLFFGDVHFSGVYSIPPDISGV
IGEVDLSGALSLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDSNGKFPNMNKALCVDSVSSVAGAFIGTSSVTACIES
TSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAMVPPYATAGALIFVGVLMTSSLARVNWDDFTESVPAFITTVMMPFTFS
ITEGIALGFMSYCIMKVCTGRWRDLNLCVVVVATLFALKIILVD

Specific function: Unknown

COG id: COG2252

COG function: function code R; Permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082309, Length=444, Percent_Identity=98.1981981981982, Blast_Score=858, Evalue=0.0,
Organism=Escherichia coli, GI1790150, Length=444, Percent_Identity=73.8738738738739, Blast_Score=639, Evalue=0.0,
Organism=Escherichia coli, GI1790499, Length=431, Percent_Identity=40.3712296983759, Blast_Score=299, Evalue=2e-82,
Organism=Escherichia coli, GI48994909, Length=441, Percent_Identity=36.0544217687075, Blast_Score=259, Evalue=2e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 46898; Mature: 46898

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELIAGMTTFLTMVYIVFVNPQILGAAQMD
CCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCC
PKVVFVTTCLIAGIGSIAMGVFANLPVALAPAMGLNAFFAFVVVGAMGISWQTGMGAIFW
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
GAVGLFLLTLFRIRYWMISNIPFSLRIGITSGIGLFIALMGLKNTGVIVANKDTLVMIGD
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEECCCEEEEEEC
LSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVVTSCCGLFFGDVHFSGVYSIPPDISGV
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCEEECCCCCCCC
IGEVDLSGALSLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDSNGKFPNMNKALCVDS
EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEECCCCCCCCCCCHHHHHH
VSSVAGAFIGTSSVTACIESTSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAMVPPYATA
HHHHHHHHHCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
GALIFVGVLMTSSLARVNWDDFTESVPAFITTVMMPFTFSITEGIALGFMSYCIMKVCTG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RWRDLNLCVVVVATLFALKIILVD
CCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELIAGMTTFLTMVYIVFVNPQILGAAQMD
CCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCC
PKVVFVTTCLIAGIGSIAMGVFANLPVALAPAMGLNAFFAFVVVGAMGISWQTGMGAIFW
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
GAVGLFLLTLFRIRYWMISNIPFSLRIGITSGIGLFIALMGLKNTGVIVANKDTLVMIGD
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEECCCEEEEEEC
LSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVVTSCCGLFFGDVHFSGVYSIPPDISGV
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCEEECCCCCCCC
IGEVDLSGALSLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDSNGKFPNMNKALCVDS
EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEECCCCCCCCCCCHHHHHH
VSSVAGAFIGTSSVTACIESTSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAMVPPYATA
HHHHHHHHHCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
GALIFVGVLMTSSLARVNWDDFTESVPAFITTVMMPFTFSITEGIALGFMSYCIMKVCTG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RWRDLNLCVVVVATLFALKIILVD
CCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]