| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218691875
Identifier: 218691875
GI number: 218691875
Start: 4194540
End: 4195835
Strand: Reverse
Name: 218691875
Synonym: ECED1_4274
Alternate gene names: NA
Gene position: 4195835-4194540 (Counterclockwise)
Preceding gene: 218691876
Following gene: 218691874
Centisome position: 80.54
GC content: 50.62
Gene sequence:
>1296_bases ATGGCTATCAAATCACCTCCCGGACTTATTCCTTTATCACACTTATCGGGTGAGGAACTCCTGGCCCACCTGCGCTTTAA CCGGGTTACCGATGAAAAAGGACGTTATCTGCCTTTTGATGAGTTGCAGTACCGCATCAAAAAAGGAGAAAACGTCGATG TGGCGTGGACGCTTACCCGTCTGGCGCGCAACGCGGCGATCCAACGAATTAATTATTGCAATGAAGCGGGTGAACAGGCC GGATTCAACATTACCCCGGTGATTGCAGAAGCGTGCGAGCTTGTCGACAAACGTGCTACCGCGCTGGCGCTGAAAGATCA GACTGAACGGTTACGCGGGGCCGGAGCCGAGTTAAGCCAGTTACGCCTGGAAGAGCCGATCACCAGCTCCCAGCTGGAAG GTGCGAATACTACAACGCTGGTGGCGAGAAAAATGCTGGAAACAGGGCGGTCGCCACGCACTGAAGACGAGCATATGATT GCGGGAAATGCCCGGCTGATGGCGGAAATTCCGCACTTACTCGCAGAACCGCTGACACCTGCGCTTATTCGCCAGTTACA TGCCATTGGTATGGGTGGAATCAATGACGCGAAATATCGTCCGGGAGAATTTCGTGAAACAGATGATGTTGTGATCGCCG ACTATGATGGCAATATAGTGCATCAACCGCCCGCTGCGGCATTGTTACCGGAACGGCTGGAAAAAGTTTGCCAGTGGTTA AACAGCCATGAAGGGTATATTCATCCGTTGGTCCGTGCCTGCATTCTGCATTTTATGCTGGCCCATGAACATCCGTTTCG GGATGGCAACGGGCGCACCAGTCGGGCGCTGTTTTACTGGTATATGCTGAAATCGGGCTACGATGTTTTTAAATATATTT CCATCAGCCGTTTGCTTCATGCAGCGCCAGTAAAATATGCCGCCAGCTACCAGTACACTGAATCAGATGGTATGGATCTG ACTTATTTCCTTGAATATCAGGCGGGTGTCATTAAACGTGCTCTGCAAAACTGGCAGCAGCATATCGATGAAATTACACA ACGAAGCGCAAAACTCGATAGTGTGCTGTTTAGCTCTGGTGTGCTTAAACGCCTGAATCCGCGCCAGGTAACGCTCCTGA ATGTGATGCTCGCCAATCCGGGGAAAGAGTACACAGTTGCTGAAATTAGTGTGAGTCTGAGCGTCTCGGATAATACGGCG CGGACCGATTTACGGACAATTGTTAAAGAAGGATTCGCGCAAGAGAAAAGAATTAATAACCAGCAAGCAGTGTACGTCGC ACACTACCCGCTGTAG
Upstream 100 bases:
>100_bases TCAGCCGCTTTTTCAACTATCTCAAAACTTGCTTTTTTTGAGATAGTTTCTCTTTCCTGCTATACACTATCTCAATATTG CGCTTTTTTGAGATAAGCAC
Downstream 100 bases:
>100_bases CTTTTGCCCGTAAATTCGTGATAGCCGTCGTAAAGCTGTTACCGACTGGCGAAGATTTCGCCAGTCACGTCTACCCTTGT TATACCTCACACAGCAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Fic Family Protein; Xin-Antitoxin System Toxin Component Fic Family; Fic Protein Family; Filamentation Induced By CAMP Protein Family Protein; AsnC Family Regulatory Protein; Regulatory Protein
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MAIKSPPGLIPLSHLSGEELLAHLRFNRVTDEKGRYLPFDELQYRIKKGENVDVAWTLTRLARNAAIQRINYCNEAGEQA GFNITPVIAEACELVDKRATALALKDQTERLRGAGAELSQLRLEEPITSSQLEGANTTTLVARKMLETGRSPRTEDEHMI AGNARLMAEIPHLLAEPLTPALIRQLHAIGMGGINDAKYRPGEFRETDDVVIADYDGNIVHQPPAAALLPERLEKVCQWL NSHEGYIHPLVRACILHFMLAHEHPFRDGNGRTSRALFYWYMLKSGYDVFKYISISRLLHAAPVKYAASYQYTESDGMDL TYFLEYQAGVIKRALQNWQQHIDEITQRSAKLDSVLFSSGVLKRLNPRQVTLLNVMLANPGKEYTVAEISVSLSVSDNTA RTDLRTIVKEGFAQEKRINNQQAVYVAHYPL
Sequences:
>Translated_431_residues MAIKSPPGLIPLSHLSGEELLAHLRFNRVTDEKGRYLPFDELQYRIKKGENVDVAWTLTRLARNAAIQRINYCNEAGEQA GFNITPVIAEACELVDKRATALALKDQTERLRGAGAELSQLRLEEPITSSQLEGANTTTLVARKMLETGRSPRTEDEHMI AGNARLMAEIPHLLAEPLTPALIRQLHAIGMGGINDAKYRPGEFRETDDVVIADYDGNIVHQPPAAALLPERLEKVCQWL NSHEGYIHPLVRACILHFMLAHEHPFRDGNGRTSRALFYWYMLKSGYDVFKYISISRLLHAAPVKYAASYQYTESDGMDL TYFLEYQAGVIKRALQNWQQHIDEITQRSAKLDSVLFSSGVLKRLNPRQVTLLNVMLANPGKEYTVAEISVSLSVSDNTA RTDLRTIVKEGFAQEKRINNQQAVYVAHYPL >Mature_430_residues AIKSPPGLIPLSHLSGEELLAHLRFNRVTDEKGRYLPFDELQYRIKKGENVDVAWTLTRLARNAAIQRINYCNEAGEQAG FNITPVIAEACELVDKRATALALKDQTERLRGAGAELSQLRLEEPITSSQLEGANTTTLVARKMLETGRSPRTEDEHMIA GNARLMAEIPHLLAEPLTPALIRQLHAIGMGGINDAKYRPGEFRETDDVVIADYDGNIVHQPPAAALLPERLEKVCQWLN SHEGYIHPLVRACILHFMLAHEHPFRDGNGRTSRALFYWYMLKSGYDVFKYISISRLLHAAPVKYAASYQYTESDGMDLT YFLEYQAGVIKRALQNWQQHIDEITQRSAKLDSVLFSSGVLKRLNPRQVTLLNVMLANPGKEYTVAEISVSLSVSDNTAR TDLRTIVKEGFAQEKRINNQQAVYVAHYPL
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24582217, Length=165, Percent_Identity=35.1515151515151, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48506; Mature: 48375
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKSPPGLIPLSHLSGEELLAHLRFNRVTDEKGRYLPFDELQYRIKKGENVDVAWTLTR CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH LARNAAIQRINYCNEAGEQAGFNITPVIAEACELVDKRATALALKDQTERLRGAGAELSQ HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LRLEEPITSSQLEGANTTTLVARKMLETGRSPRTEDEHMIAGNARLMAEIPHLLAEPLTP HHHHCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCH ALIRQLHAIGMGGINDAKYRPGEFRETDDVVIADYDGNIVHQPPAAALLPERLEKVCQWL HHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHH NSHEGYIHPLVRACILHFMLAHEHPFRDGNGRTSRALFYWYMLKSGYDVFKYISISRLLH HCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEHHHHCCCHHHHHHHHHHHHH AAPVKYAASYQYTESDGMDLTYFLEYQAGVIKRALQNWQQHIDEITQRSAKLDSVLFSSG HCCHHHHHCEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLKRLNPRQVTLLNVMLANPGKEYTVAEISVSLSVSDNTARTDLRTIVKEGFAQEKRINN HHHHCCCCEEEEEEEEECCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC QQAVYVAHYPL CCEEEEEECCC >Mature Secondary Structure AIKSPPGLIPLSHLSGEELLAHLRFNRVTDEKGRYLPFDELQYRIKKGENVDVAWTLTR CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH LARNAAIQRINYCNEAGEQAGFNITPVIAEACELVDKRATALALKDQTERLRGAGAELSQ HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LRLEEPITSSQLEGANTTTLVARKMLETGRSPRTEDEHMIAGNARLMAEIPHLLAEPLTP HHHHCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCH ALIRQLHAIGMGGINDAKYRPGEFRETDDVVIADYDGNIVHQPPAAALLPERLEKVCQWL HHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHH NSHEGYIHPLVRACILHFMLAHEHPFRDGNGRTSRALFYWYMLKSGYDVFKYISISRLLH HCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEHHHHCCCHHHHHHHHHHHHH AAPVKYAASYQYTESDGMDLTYFLEYQAGVIKRALQNWQQHIDEITQRSAKLDSVLFSSG HCCHHHHHCEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLKRLNPRQVTLLNVMLANPGKEYTVAEISVSLSVSDNTARTDLRTIVKEGFAQEKRINN HHHHCCCCEEEEEEEEECCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC QQAVYVAHYPL CCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA