Click here to switch to the map view.

The map label for this gene is yhdN [H]

Identifier: 218691580

GI number: 218691580

Start: 3880529

End: 3880897

Strand: Reverse

Name: yhdN [H]

Synonym: ECED1_3957

Alternate gene names: 218691580

Gene position: 3880897-3880529 (Counterclockwise)

Preceding gene: 218691581

Following gene: 218691579

Centisome position: 74.5

GC content: 45.8

Gene sequence:

>369_bases
ATGTGGTTACTTGACCAGTGGGCAGAGCGTCATATAGCAGAAGCGCAAGCGAAAGGTGAGTTTGATAACCTGGTAGGTAG
CGGCGAACCATTGATACTGGATGATGATTCTCATGTGCCACCGGAATTACGTGCGGGGTATCGCTTGCTGAAGAATGCTG
GTTGCTTACCGCCAGAACTTGAGAATAGGAGGGAAGCAATACAGCTTCTGGATATTCTCAAAGGTATCCGTCATGATGAT
CCGCAATATCAAGAGGTTAGTCGTCGATTGTCATTACTGGAATTGAAGCTGCGACAAGCTGGATTGAGTACCGATTTTTT
ACGCGGCGATTATGCTGACAAGTTGTTGAACAAAATCAACGATAACTAG

Upstream 100 bases:

>100_bases
AGCAACGTAAAAAACCCGCCCCGGCGGGTTTTTTTATACCCGTAGCATCCCCACTTATCTACAATAGCTGTACTCTTTTT
GTTCATCCCCTGGAGTATTT

Downstream 100 bases:

>100_bases
TGGAGTATGTATGTATCGCATTGGTGAGCTGGCAAAAATGGCGGAAGTAACACCCGACACGATTCGTTATTACGAAAAGC
AGCAGATGATGGAGCATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MWLLDQWAERHIAEAQAKGEFDNLVGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELENRREAIQLLDILKGIRHDD
PQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLNKINDN

Sequences:

>Translated_122_residues
MWLLDQWAERHIAEAQAKGEFDNLVGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELENRREAIQLLDILKGIRHDD
PQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLNKINDN
>Mature_122_residues
MWLLDQWAERHIAEAQAKGEFDNLVGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELENRREAIQLLDILKGIRHDD
PQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLNKINDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789688, Length=122, Percent_Identity=97.5409836065574, Blast_Score=240, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018961 [H]

Pfam domain/function: PF09350 DUF1992 [H]

EC number: NA

Molecular weight: Translated: 13958; Mature: 13958

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLLDQWAERHIAEAQAKGEFDNLVGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPEL
CCCHHHHHHHHHHHHHHCCHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCHH
ENRREAIQLLDILKGIRHDDPQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLNKIN
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
DN
CC
>Mature Secondary Structure
MWLLDQWAERHIAEAQAKGEFDNLVGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPEL
CCCHHHHHHHHHHHHHHCCHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCHH
ENRREAIQLLDILKGIRHDDPQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLNKIN
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
DN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8063098; 9278503 [H]