| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is kdgK [H]
Identifier: 218691547
GI number: 218691547
Start: 3847098
End: 3848108
Strand: Direct
Name: kdgK [H]
Synonym: ECED1_3915
Alternate gene names: 218691547
Gene position: 3847098-3848108 (Clockwise)
Preceding gene: 218691546
Following gene: 218691548
Centisome position: 73.85
GC content: 48.76
Gene sequence:
>1011_bases ATGAGTGCTTTACCTGGTCCAATCGCGAAAGGCTTCAGGAATGAGAGGGGTTTTGTGACAATAACTATCTGCGCTATGGG CGAATTGCTGGCCGAGTTTTTGTCCCGCAACCCACATCAAAAATTCACTCAGCCTGGGGAGTTTATCGGGCCATTTCCCA GCGGTGCGCCAGCAATTTTTGCTGCTCAGGTGGCAAAACTGTCCCATCGGGCCATCTTCTTTGGATGTGTTGGTAATGAT GATTTTGCCCGACTCATTATAGAGCGTCTCCGTCATGAAGGTGTCATTACCGATGGGATCCATGTTATGAACAATGCCGT CACAGGTACGGCGTTCGTGAGTTATCAAAATCCCCAGCTGCGGGATTTCGTCTTTAATATCCCTAACAGCGCCTGCGGTT TGTTTACTGCCGAGCACATTGATAAGGATCTGCTTAAACAGTGTAACCATCTGCATATTGTGGGCTCATCGTTGTTCTCA TTTCGCATGATCGATGTCATGCGTAAAGCAATAACGACGATCAAATCGGCTGGCGGCACCGTTTCTTTCGATCCCAATAT TCGCAAAGAGATGCTGAGCATTCCTGAAATGGCGCAGGCTCTCGATTATTTGATTGAATATACGGATATTTTTATCCCCA GCGAAAGCGAACTCCCTTTCTTCGCGCGTCACAAAAATCTGTCAGAGGAACAGATTGTTAGCGATCTTCTCCACGGCGGC GTAAAACATGTGGCGATAAAACGCGCCCAGCGTGGGGCCAGCTATTACAAGCTTAAAAACGGTACATTACACGCCCAGCA TGTTGCAGGTCACGATATCGAAATTATCGATCCAACGGGTGCAGGCGACTGCTTTGGCGCAACGTTTATCACTCTTTTCT TATCCGGTTTCCCGGCACACAAGGCACTGCAATATGCAAATGCCAGCGGCGCGCTCGCCGTAATGCGGCAAGGTCCGATG GAAGGGATATCCTCACTGGCAGACATTGAAGACTTTTTGCAGCAGTACTGA
Upstream 100 bases:
>100_bases CATTTGCATCAGGCAGAAAATGTGATCGTCAGCCGCAGCATTAACGAACAATATCAGCAACAATTGCAGTCGGCTGATTT CGTTATCCTTTATACCAGTA
Downstream 100 bases:
>100_bases ACGGCAATTTTCTGTCAGATCATTTTCCCTGCCTGAAGACTTGCCGTAGAATTGCCCGTTTCTCGTATCCCCCCATGAGG AGGACCCCTTCCGTGGACAC
Product: putative pfkB family carbohydrate kinase
Products: NA
Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSALPGPIAKGFRNERGFVTITICAMGELLAEFLSRNPHQKFTQPGEFIGPFPSGAPAIFAAQVAKLSHRAIFFGCVGND DFARLIIERLRHEGVITDGIHVMNNAVTGTAFVSYQNPQLRDFVFNIPNSACGLFTAEHIDKDLLKQCNHLHIVGSSLFS FRMIDVMRKAITTIKSAGGTVSFDPNIRKEMLSIPEMAQALDYLIEYTDIFIPSESELPFFARHKNLSEEQIVSDLLHGG VKHVAIKRAQRGASYYKLKNGTLHAQHVAGHDIEIIDPTGAGDCFGATFITLFLSGFPAHKALQYANASGALAVMRQGPM EGISSLADIEDFLQQY
Sequences:
>Translated_336_residues MSALPGPIAKGFRNERGFVTITICAMGELLAEFLSRNPHQKFTQPGEFIGPFPSGAPAIFAAQVAKLSHRAIFFGCVGND DFARLIIERLRHEGVITDGIHVMNNAVTGTAFVSYQNPQLRDFVFNIPNSACGLFTAEHIDKDLLKQCNHLHIVGSSLFS FRMIDVMRKAITTIKSAGGTVSFDPNIRKEMLSIPEMAQALDYLIEYTDIFIPSESELPFFARHKNLSEEQIVSDLLHGG VKHVAIKRAQRGASYYKLKNGTLHAQHVAGHDIEIIDPTGAGDCFGATFITLFLSGFPAHKALQYANASGALAVMRQGPM EGISSLADIEDFLQQY >Mature_335_residues SALPGPIAKGFRNERGFVTITICAMGELLAEFLSRNPHQKFTQPGEFIGPFPSGAPAIFAAQVAKLSHRAIFFGCVGNDD FARLIIERLRHEGVITDGIHVMNNAVTGTAFVSYQNPQLRDFVFNIPNSACGLFTAEHIDKDLLKQCNHLHIVGSSLFSF RMIDVMRKAITTIKSAGGTVSFDPNIRKEMLSIPEMAQALDYLIEYTDIFIPSESELPFFARHKNLSEEQIVSDLLHGGV KHVAIKRAQRGASYYKLKNGTLHAQHVAGHDIEIIDPTGAGDCFGATFITLFLSGFPAHKALQYANASGALAVMRQGPME GISSLADIEDFLQQY
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87081971, Length=308, Percent_Identity=25.974025974026, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.45 [H]
Molecular weight: Translated: 36857; Mature: 36726
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALPGPIAKGFRNERGFVTITICAMGELLAEFLSRNPHQKFTQPGEFIGPFPSGAPAIF CCCCCCHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCHHHH AAQVAKLSHRAIFFGCVGNDDFARLIIERLRHEGVITDGIHVMNNAVTGTAFVSYQNPQL HHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEECCCCH RDFVFNIPNSACGLFTAEHIDKDLLKQCNHLHIVGSSLFSFRMIDVMRKAITTIKSAGGT HHHHHCCCCCHHHHHHHHHCCHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCE VSFDPNIRKEMLSIPEMAQALDYLIEYTDIFIPSESELPFFARHKNLSEEQIVSDLLHGG EEECCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHCCCCHHHHHHHHHHCC VKHVAIKRAQRGASYYKLKNGTLHAQHVAGHDIEIIDPTGAGDCFGATFITLFLSGFPAH HHHHHHHHHHCCCCEEEECCCEEEEHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHH KALQYANASGALAVMRQGPMEGISSLADIEDFLQQY HHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SALPGPIAKGFRNERGFVTITICAMGELLAEFLSRNPHQKFTQPGEFIGPFPSGAPAIF CCCCCHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCHHHH AAQVAKLSHRAIFFGCVGNDDFARLIIERLRHEGVITDGIHVMNNAVTGTAFVSYQNPQL HHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEECCCCH RDFVFNIPNSACGLFTAEHIDKDLLKQCNHLHIVGSSLFSFRMIDVMRKAITTIKSAGGT HHHHHCCCCCHHHHHHHHHCCHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCE VSFDPNIRKEMLSIPEMAQALDYLIEYTDIFIPSESELPFFARHKNLSEEQIVSDLLHGG EEECCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHCCCCHHHHHHHHHHCC VKHVAIKRAQRGASYYKLKNGTLHAQHVAGHDIEIIDPTGAGDCFGATFITLFLSGFPAH HHHHHHHHHHCCCCEEEECCCEEEEHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHH KALQYANASGALAVMRQGPMEGISSLADIEDFLQQY HHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]