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The map label for this gene is ygjR [H]

Identifier: 218691390

GI number: 218691390

Start: 3685802

End: 3686806

Strand: Direct

Name: ygjR [H]

Synonym: ECED1_3754

Alternate gene names: 218691390

Gene position: 3685802-3686806 (Clockwise)

Preceding gene: 218691389

Following gene: 218691391

Centisome position: 70.75

GC content: 52.04

Gene sequence:

>1005_bases
ATGGAGTATCCACGCGTTATGATACGTTTCGCTGTGATTGGTACGAACTGGATCACTCGCCAGTTCGTCGAGGCCGCCCA
TGAGAGCGGTAAATACAAGTTAACCGCCGTTTATTCCCGCAGTCTTGAACAGGCCCAGCACTTCGCCAATGATTTTTCTG
TCGAGCATCTGTTTACGTCGCTGGAAGCGATGGCAGAAAGCGATGCCATTGACGCGGTGTATATTGCCAGCCCGAATTCC
CTGCACTTTTCCCAGACACAACTTTTCCTTAGTCACAAAATTCATGTGATTTGCGAGAAACCGCTGGCGTCGAATCTGGC
GGAAGTGGATGCCGCCATTGCCTGTGCGCGGGAAAATCAGGTGGTGCTGTTTGAGGCATTTAAAACGGCCTACCTGCCGA
ACTTTCATCTGTTACGCCAGGCGCTGCCGAAAGTCGGCAAACTGCGTAAAGTCTTTTTCAACTATTGCCAGTATTCCTCG
CAGTATCAGCGTTACCTGGACGGAGAGAATCCCAACACCTTCAATCCGACATTCTCTAACGGTTCGATTATGGATATCGG
CTTTTACTGCCTGGCGTCGGCGGTGGCATTATTCGGTGAACCGAAAAGCGTGCAGGCAACCGCCAGTTTGCTGGCAAGCG
GTGTGGATGCCCACGGCGTGGTGGTGATGGATTACGGTGATTTCAGCGTTACGTTGCAGCACTCAAAAGTGAGCGATTCT
GTCCTGGCAAGCGAGATTCAGGGCGAAGCGGGAGCGCTGGTGATTGAAAAACTCTCTGAATGCCAGAAAGTCTGCTTTGT
ACCGCGTGGCAGCCAGATGCAGGATCTCACCCAGCCACAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTA
CCCTGGTGGATGAGCATCTGGTGAATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACTGAGATCCGC
CGCCAGACTGGGGTGATTTTTCCGGCAGATAACGTAAAACTATAA

Upstream 100 bases:

>100_bases
TGGGCCGTTTAGTGAGCATGGCTGTCCGGCGAAAGAATAATGCGTATCTGCGCACGTCGAAGATAAAAAAGGCGTGCTAC
ATTGACGAGAGAATCCCTTT

Downstream 100 bases:

>100_bases
TTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGACTGAATGGTCTGTCATACTTTGTTACCTGCAA
AGGGGAGTAACTTCATTGTC

Product: putative NAD(P)-binding dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNS
LHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQVVLFEAFKTAYLPNFHLLRQALPKVGKLRKVFFNYCQYSS
QYQRYLDGENPNTFNPTFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLQHSKVSDS
VLASEIQGEAGALVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVNHPGLAVSRITAKLLTEIR
RQTGVIFPADNVKL

Sequences:

>Translated_334_residues
MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNS
LHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQVVLFEAFKTAYLPNFHLLRQALPKVGKLRKVFFNYCQYSS
QYQRYLDGENPNTFNPTFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLQHSKVSDS
VLASEIQGEAGALVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVNHPGLAVSRITAKLLTEIR
RQTGVIFPADNVKL
>Mature_334_residues
MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNS
LHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQVVLFEAFKTAYLPNFHLLRQALPKVGKLRKVFFNYCQYSS
QYQRYLDGENPNTFNPTFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLQHSKVSDS
VLASEIQGEAGALVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVNHPGLAVSRITAKLLTEIR
RQTGVIFPADNVKL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=347, Percent_Identity=24.7838616714697, Blast_Score=97, Evalue=2e-20,
Organism=Escherichia coli, GI145693182, Length=328, Percent_Identity=97.5609756097561, Blast_Score=663, Evalue=0.0,
Organism=Drosophila melanogaster, GI24581117, Length=344, Percent_Identity=25.8720930232558, Blast_Score=104, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24581115, Length=339, Percent_Identity=23.3038348082596, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24584727, Length=172, Percent_Identity=28.4883720930233, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37095; Mature: 37095

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTS
CCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCHHHHHHHH
LEAMAESDAIDAVYIASPNSLHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQ
HHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCC
VVLFEAFKTAYLPNFHLLRQALPKVGKLRKVFFNYCQYSSQYQRYLDGENPNTFNPTFSN
EEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLQHSKVSDS
CCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCHHH
VLASEIQGEAGALVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHL
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VNHPGLAVSRITAKLLTEIRRQTGVIFPADNVKL
HCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC
>Mature Secondary Structure
MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTS
CCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCHHHHHHHH
LEAMAESDAIDAVYIASPNSLHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQ
HHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCC
VVLFEAFKTAYLPNFHLLRQALPKVGKLRKVFFNYCQYSSQYQRYLDGENPNTFNPTFSN
EEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLQHSKVSDS
CCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCHHH
VLASEIQGEAGALVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHL
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VNHPGLAVSRITAKLLTEIRRQTGVIFPADNVKL
HCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]