Click here to switch to the map view.

The map label for this gene is ygjO [H]

Identifier: 218691387

GI number: 218691387

Start: 3683248

End: 3684384

Strand: Reverse

Name: ygjO [H]

Synonym: ECED1_3751

Alternate gene names: 218691387

Gene position: 3684384-3683248 (Counterclockwise)

Preceding gene: 218691393

Following gene: 218691386

Centisome position: 70.72

GC content: 53.91

Gene sequence:

>1137_bases
ATGAGCCACTTAGACAACGGTTTCCGTTCACTGACACTACAACGTTTTCCGGCGACGGATGACGTTAACCCGCTACAGGC
GTGGGAAGCGGCGGATGAATATTTGCTGCAACAGTTGGACGACACAGAAATCCGCGGCCCGGTGTTGATCCTGAATGATG
CTTTTGGTGCGTTAAGCTGTGTGCTGGCGGAACATAAGCCCTACAGCATTGGTGACTCATACATCAGCGAGTTGGCGACG
CGTGAGAATTTACGTCTCAACGGCATTGATGAGTCGAGCGTGAAGTTCCTCGACAGCACCGCCGACTACCCGCAACAGCC
GGGGGTGGTGCTGATCAAAGTGCCGAAAACACTGGCATTGCTGGAACAACAACTGCGCGCGCTGCGCAAAGTGGTCACGC
CAGATACGCGCATTATTGCCGGTGCCAAAGCCCGTGACATTCACACTTCCACGCTGGAATTGTTCGAAAAAGTGCTCGGT
CCGACCACCACCACGCTGGCATGGAAGAAAGCGCGCCTGATTAACTGCACCTTCAACGAACCGCCGTTGGCCGATGCGCC
GCAGACCGTTAGCTGGAAGCTGGAAGGCACTGACTGGACTATCCACAACCATGCGAATGTTTTCTCCCGCACTGGGCTGG
ATATCGGCGCGCGCTTCTTTATGCAACATCTGCCAGAGAATCTCGAAGGTGAGATTGTCGATCTCGGTTGCGGTAATGGC
GTTATTGGCCTGACATTGCTCGATAAAAACCCGCAGGCGAAAGTGGTGTTTGTCGATGAATCACCGATGGCGGTTGCTTC
CAGCCGTTTGAACGTTGAAACCAACATGCCCGAGGCGTTGGATCGCTGCGAGTTTATGATCAACAACGCGCTCTCCGGCG
TGGAGCCTTTCCGTTTTAATGCTGTGCTCTGCAACCCGCCGTTTCATCAGCAACATGCGCTGACCGATAACGTCGCCTGG
GAGATGTTCCACCATGCCCGCCGCTGCCTGAAAATCAACGGCGAGCTGTATATCGTTGCCAACCGTCACCTGGATTACTT
CCATAAACTGAAGAAAATTTTCGGCAACTGCACCACCATCGCCACGAATAATAAATTTGTGGTGCTGAAAGCAGTGAAGC
TGGGGCGTCGTCGGTAA

Upstream 100 bases:

>100_bases
AAGTAAGATTGCTCATAACCGCCCACGAAAAAGAGAAAAAGGGTATACTCACGCACCCTTTTCAGGGGCAACGTCGAAAT
TTTATCATTCAGGAGGGCCG

Downstream 100 bases:

>100_bases
GATTGGGGGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGTTCAGCACATTACCCCCAGGTCGGATAAGA
CGCGGCAAACGTCGCATCCG

Product: putative methyltransferase small domain

Products: NA

Alternate protein names: 23S rRNA m2G1835 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rlmG [H]

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCVLAEHKPYSIGDSYISELAT
RENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTPDTRIIAGAKARDIHTSTLELFEKVLG
PTTTTLAWKKARLINCTFNEPPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG
VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAW
EMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR

Sequences:

>Translated_378_residues
MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCVLAEHKPYSIGDSYISELAT
RENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTPDTRIIAGAKARDIHTSTLELFEKVLG
PTTTTLAWKKARLINCTFNEPPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG
VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAW
EMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR
>Mature_377_residues
SHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCVLAEHKPYSIGDSYISELATR
ENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTPDTRIIAGAKARDIHTSTLELFEKVLGP
TTTTLAWKKARLINCTFNEPPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGV
IGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWE
MFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR

Specific function: Specifically methylates the guanosine in position 1835 (m2G1835) of 23S rRNA [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RlmG family [H]

Homologues:

Organism=Escherichia coli, GI87082206, Length=378, Percent_Identity=99.2063492063492, Blast_Score=779, Evalue=0.0,
Organism=Escherichia coli, GI1790830, Length=173, Percent_Identity=33.5260115606936, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR017237
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: =2.1.1.174 [H]

Molecular weight: Translated: 42339; Mature: 42208

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC
CCCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHH
VLAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL
HHHCCCCCCCCHHHHHHHHHHCCCEECCCCHHHHHHHHCCCCCCCCCCEEEEECCHHHHH
LEQQLRALRKVVTPDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE
HHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECCC
PPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG
CCCCCCCCCEEEEECCCEEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCC
VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFN
EEEEEEECCCCCEEEEEECCCCHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEE
AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI
EEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCHHHHHHHHHHHCCCEEE
ATNNKFVVLKAVKLGRRR
EECCCEEEEEEECCCCCC
>Mature Secondary Structure 
SHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC
CCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHH
VLAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL
HHHCCCCCCCCHHHHHHHHHHCCCEECCCCHHHHHHHHCCCCCCCCCCEEEEECCHHHHH
LEQQLRALRKVVTPDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE
HHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECCC
PPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG
CCCCCCCCCEEEEECCCEEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCC
VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFN
EEEEEEECCCCCEEEEEECCCCHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEE
AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI
EEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCHHHHHHHHHHHCCCEEE
ATNNKFVVLKAVKLGRRR
EECCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA