| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218691227
Identifier: 218691227
GI number: 218691227
Start: 3502791
End: 3503558
Strand: Reverse
Name: 218691227
Synonym: ECED1_3580
Alternate gene names: NA
Gene position: 3503558-3502791 (Counterclockwise)
Preceding gene: 218691228
Following gene: 218691226
Centisome position: 67.25
GC content: 58.59
Gene sequence:
>768_bases ATGAGTGAAAAAAAACAGAAGACATTACCGTCAGTGCATTCATCTCCTCTTGATGGGTGGACCTGTGTGTCACCCATGCT TTCCGTGGGATTTGTACTGACCGTTCTGGTTGCGACCATTCTGGCGGTTTGTGGCCTCTATCGTTACAGCGGGGAGCAGG ATGAACGCATTGCCGCACTGGAGGGGCAAATGAAAACGTATTCAGATGCTCTCGCGTTGTCGGGAAGTGAGTTGGAACCG CTCAGGTCCCGGCTGGCTGAAACCGAAAAACAGCTGAAAAGCGTGACGGAGCGACTGACATTGCTGGAGCAACGACCTGT ACTGACGGAGGAAGAGCATGCACGCACTGGTCAGATGGCCGCCAGCCTGGCATCACTGCAGGCCACGCTGGCGCAGCAGG GAGAAACGCTTCGTGCGTATGACCGGCGACTGGAGAAGCTGGAGAAGGCGCCATTCACCCCGGTATCACCGTCATCTGCG AAAGGAACGGGCACGGTGAAGAGCACACCGGCGGTCACGCCACGCCAGAAAAATGGCTCTTCCGGCGTTTCAGTTATCAG CCGCAGCGCACCGTTTGTGCTGACAGGCACGGAGCAGCGTGGCGGACGCACATATGCTGCGGTGGCTCCCCGTGGATTTA CCCGTCTTTCAGATGTGACGCTGCTGGGTGAAGGGGAGAGCACGGCCGGCTGGATGCTTGAGCGTGCCGGACGGGGAGAA GCCTCGTTCCGGGTGAACGGACGTCAGGTCCGGGTCATGGTGGAGTGA
Upstream 100 bases:
>100_bases GGGTTGTCTGTCACAGCCTGCGGGAAGGTTATCAGTTGCCGCCGGGCCAGCTGGCGCCGGTACCGGCCGGTGTCAGGGGC GCAGGAGCGGGGCTTAAAAA
Downstream 100 bases:
>100_bases TGAAATGAAAATGAAGAATCTGTCACCGGTGCTCATGCTGCTCATTTCCCTGCAGACGGTGGCTGCCGTACGGGAGAGTG CGCCTGAGGGCACACGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MSEKKQKTLPSVHSSPLDGWTCVSPMLSVGFVLTVLVATILAVCGLYRYSGEQDERIAALEGQMKTYSDALALSGSELEP LRSRLAETEKQLKSVTERLTLLEQRPVLTEEEHARTGQMAASLASLQATLAQQGETLRAYDRRLEKLEKAPFTPVSPSSA KGTGTVKSTPAVTPRQKNGSSGVSVISRSAPFVLTGTEQRGGRTYAAVAPRGFTRLSDVTLLGEGESTAGWMLERAGRGE ASFRVNGRQVRVMVE
Sequences:
>Translated_255_residues MSEKKQKTLPSVHSSPLDGWTCVSPMLSVGFVLTVLVATILAVCGLYRYSGEQDERIAALEGQMKTYSDALALSGSELEP LRSRLAETEKQLKSVTERLTLLEQRPVLTEEEHARTGQMAASLASLQATLAQQGETLRAYDRRLEKLEKAPFTPVSPSSA KGTGTVKSTPAVTPRQKNGSSGVSVISRSAPFVLTGTEQRGGRTYAAVAPRGFTRLSDVTLLGEGESTAGWMLERAGRGE ASFRVNGRQVRVMVE >Mature_254_residues SEKKQKTLPSVHSSPLDGWTCVSPMLSVGFVLTVLVATILAVCGLYRYSGEQDERIAALEGQMKTYSDALALSGSELEPL RSRLAETEKQLKSVTERLTLLEQRPVLTEEEHARTGQMAASLASLQATLAQQGETLRAYDRRLEKLEKAPFTPVSPSSAK GTGTVKSTPAVTPRQKNGSSGVSVISRSAPFVLTGTEQRGGRTYAAVAPRGFTRLSDVTLLGEGESTAGWMLERAGRGEA SFRVNGRQVRVMVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27501; Mature: 27369
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKKQKTLPSVHSSPLDGWTCVSPMLSVGFVLTVLVATILAVCGLYRYSGEQDERIAAL CCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH EGQMKTYSDALALSGSELEPLRSRLAETEKQLKSVTERLTLLEQRPVLTEEEHARTGQMA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ASLASLQATLAQQGETLRAYDRRLEKLEKAPFTPVSPSSAKGTGTVKSTPAVTPRQKNGS HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGVSVISRSAPFVLTGTEQRGGRTYAAVAPRGFTRLSDVTLLGEGESTAGWMLERAGRGE CHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCHHHHCEEEEECCCCCHHHHHHHCCCCC ASFRVNGRQVRVMVE CEEEECCEEEEEEEC >Mature Secondary Structure SEKKQKTLPSVHSSPLDGWTCVSPMLSVGFVLTVLVATILAVCGLYRYSGEQDERIAAL CCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH EGQMKTYSDALALSGSELEPLRSRLAETEKQLKSVTERLTLLEQRPVLTEEEHARTGQMA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ASLASLQATLAQQGETLRAYDRRLEKLEKAPFTPVSPSSAKGTGTVKSTPAVTPRQKNGS HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGVSVISRSAPFVLTGTEQRGGRTYAAVAPRGFTRLSDVTLLGEGESTAGWMLERAGRGE CHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCHHHHCEEEEECCCCCHHHHHHHCCCCC ASFRVNGRQVRVMVE CEEEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA