| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218691222
Identifier: 218691222
GI number: 218691222
Start: 3499495
End: 3500325
Strand: Reverse
Name: 218691222
Synonym: ECED1_3575
Alternate gene names: NA
Gene position: 3500325-3499495 (Counterclockwise)
Preceding gene: 218691223
Following gene: 218691221
Centisome position: 67.19
GC content: 54.87
Gene sequence:
>831_bases GTGAGCTCACCGGAGAAAAGCGAAGATGACAGGAGAGCGGGGATGAACGTTTCATTTACTGAACAGGTGCAGAGGAATAT GCCGCAATGGGCGAATGAACCTTTACGGGCATGGAATGCGGCAGAGTTTGCGGCAATGTCGGATTTTATTACGGAACACT ACTGGACGGGGCAGGGCAGCATCAATGTGTTCCGCATCGTGGGAACTGACCATCCACAGTATGCCGGAATGAGCTGGCTG GAGTTGCTGGAGCGCGGTAAGCGTATGGATATCAATATCCCGTTGGTGGAGAAGAACCCGGGGTATTACACGCAGGCAGA ACAACTGCATGCCGGGATGAGTTTTGTCAGCACGGATGGCATTCACTGGTATGTCAGTGCTGATGGTAATCACCGCAGTT GTCTGGCCCGCTTTCTGTTTCACCTGCAGGGAGAGGAGCGCACACAGCTTCACAACGTGGCCCAGAGCATTTATCACGCA GACCGGGCGTTCTGGTCTGCCTGTCGGGAAATTCACAACCTGGCTGATGTTCTCTCCCGGCATGGTGTGTATCTTCGTCT GCAGACCCGGCGGCAGTGTGTTTCCCGTGAAGACCTGGCCTGCTGGAAAGTGGACCGTTTCAGCACAGAAGCTCAGTTGA CAGTGGATGACGGACGGGCTGGCGGACATGCGTCTGCGGTGTATAAGGTATTGTTACTGAGTGCAGAAGACGCATGGCGG GAGGTGAGGAAATTACAGAACAGAGCTGAGGCGTTGTCAGCGTCACCGGAGACAGATATCCCCCGCTCATGGTGGCTGCG CCTTTTACAGCGAGGACGCGGACATGAGTAA
Upstream 100 bases:
>100_bases ACGGGACCGGCCAGCCGGGCACGGCTTTCGCTGTGGCCGGATATTGAACTGATCAGCGGACAGCGTCTGCTGAAACTGTT GAACGGGCGATTACTGACCG
Downstream 100 bases:
>100_bases CCGTTATGTTATTGAGGCGTTACTGAGGCCAGCTGTGGAGTTCAATACGGCCGTGGTTGCGGCAACGGCGGCCGGTATCT GTGTGACAGCCCCCTGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSSPEKSEDDRRAGMNVSFTEQVQRNMPQWANEPLRAWNAAEFAAMSDFITEHYWTGQGSINVFRIVGTDHPQYAGMSWL ELLERGKRMDINIPLVEKNPGYYTQAEQLHAGMSFVSTDGIHWYVSADGNHRSCLARFLFHLQGEERTQLHNVAQSIYHA DRAFWSACREIHNLADVLSRHGVYLRLQTRRQCVSREDLACWKVDRFSTEAQLTVDDGRAGGHASAVYKVLLLSAEDAWR EVRKLQNRAEALSASPETDIPRSWWLRLLQRGRGHE
Sequences:
>Translated_276_residues MSSPEKSEDDRRAGMNVSFTEQVQRNMPQWANEPLRAWNAAEFAAMSDFITEHYWTGQGSINVFRIVGTDHPQYAGMSWL ELLERGKRMDINIPLVEKNPGYYTQAEQLHAGMSFVSTDGIHWYVSADGNHRSCLARFLFHLQGEERTQLHNVAQSIYHA DRAFWSACREIHNLADVLSRHGVYLRLQTRRQCVSREDLACWKVDRFSTEAQLTVDDGRAGGHASAVYKVLLLSAEDAWR EVRKLQNRAEALSASPETDIPRSWWLRLLQRGRGHE >Mature_275_residues SSPEKSEDDRRAGMNVSFTEQVQRNMPQWANEPLRAWNAAEFAAMSDFITEHYWTGQGSINVFRIVGTDHPQYAGMSWLE LLERGKRMDINIPLVEKNPGYYTQAEQLHAGMSFVSTDGIHWYVSADGNHRSCLARFLFHLQGEERTQLHNVAQSIYHAD RAFWSACREIHNLADVLSRHGVYLRLQTRRQCVSREDLACWKVDRFSTEAQLTVDDGRAGGHASAVYKVLLLSAEDAWRE VRKLQNRAEALSASPETDIPRSWWLRLLQRGRGHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31730; Mature: 31599
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPEKSEDDRRAGMNVSFTEQVQRNMPQWANEPLRAWNAAEFAAMSDFITEHYWTGQGS CCCCCCCCCHHHHCCCCCHHHHHHHCCCHHCCCHHHHCCHHHHHHHHHHHHHHEECCCCC INVFRIVGTDHPQYAGMSWLELLERGKRMDINIPLVEKNPGYYTQAEQLHAGMSFVSTDG EEEEEEEECCCCCCCCCHHHHHHHCCCCEECEEEEEECCCCCCHHHHHHHHCHHHEECCC IHWYVSADGNHRSCLARFLFHLQGEERTQLHNVAQSIYHADRAFWSACREIHNLADVLSR EEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGVYLRLQTRRQCVSREDLACWKVDRFSTEAQLTVDDGRAGGHASAVYKVLLLSAEDAWR CCEEEEEHHHHHHCCCCCCCEEEHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHH EVRKLQNRAEALSASPETDIPRSWWLRLLQRGRGHE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure SSPEKSEDDRRAGMNVSFTEQVQRNMPQWANEPLRAWNAAEFAAMSDFITEHYWTGQGS CCCCCCCCHHHHCCCCCHHHHHHHCCCHHCCCHHHHCCHHHHHHHHHHHHHHEECCCCC INVFRIVGTDHPQYAGMSWLELLERGKRMDINIPLVEKNPGYYTQAEQLHAGMSFVSTDG EEEEEEEECCCCCCCCCHHHHHHHCCCCEECEEEEEECCCCCCHHHHHHHHCHHHEECCC IHWYVSADGNHRSCLARFLFHLQGEERTQLHNVAQSIYHADRAFWSACREIHNLADVLSR EEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGVYLRLQTRRQCVSREDLACWKVDRFSTEAQLTVDDGRAGGHASAVYKVLLLSAEDAWR CCEEEEEHHHHHHCCCCCCCEEEHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHH EVRKLQNRAEALSASPETDIPRSWWLRLLQRGRGHE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA