| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218691201
Identifier: 218691201
GI number: 218691201
Start: 3480094
End: 3481614
Strand: Reverse
Name: 218691201
Synonym: ECED1_3554
Alternate gene names: NA
Gene position: 3481614-3480094 (Counterclockwise)
Preceding gene: 218691202
Following gene: 218691199
Centisome position: 66.83
GC content: 54.9
Gene sequence:
>1521_bases GTGACGACCAATAACTATCTGGAATATTTTCTGACCCTGCTGGGCTGGCTGGTTAATAACGGTCTGTGGGATTTGCTGAT CGGCACGGGACTGTTTGCGCTTCCTCTGGCTTTCAAAGTGATCGGTATCTGGCTGAAGGTGAGGGAAGAGGGGGCGGACG AAGGCAACAAGGGGATGCTCTCGTTACCCAGCATCGAGAATGCATTGTATGGTGCGTTTTTTGTGATGGTGGCGTCCTGT GTACCGCTGGTTCAGGTGACGCTGGATACCCTGAAGTTTGATCGCAGCCGGGCTCAGACCTGTGGTGTGTGGACGCCGAA AGCCCCCGGGGACACCGGTTATCAGGGGATTATCAGCAGTCTGGGAGATAAGACTGCTGCGGCCCCGATCTGGTGGGTTG TTGTGCATAAGCTTTCCAAAGGGGTGACACAGGCGGCCGTGGCGTCCATTCCCTGCAGGCCTGATCTGCGGCAACTGCGT TTTGAAGTGCAGAGGACGTTCATTGCGAACAGGGCGCTGGCCGATGAGTTGCAGGATTTTACCAATGACTGCTACTCGCT GGCGATGTACCAGTGGAAACAACGTGACCAGGGTATGACGAAGGACAGAAAGGTGCTGTCGGATATCAGCTGGATTGGGA GCAGCACGTTCATGCAGGGGGATTACGGCACGCTGCAGTCCAGAACGCCAAGGGCGGCGTTTCCGTGGAATAACGCCCGT GACAGCGGTCGTCCGGATACGGGGCGCGGAGGTTACCCAACGTGCAGGGAGTGGTGGAACGACAGCAGTGTGGGGCTGAA AAAGCGGGTTACGGAGGAAGTTGATGAAGGGCTGTGGCTGCGTCTTTCGGCAGCGATGAAGCTTCTGGGGAACAGCCAGG CGACTTATCAGGAGGAGATTATCAAACGGCTGGTCAGTCCGGCTAACCTGACGATTTCTCAGGGGGGAGAAGTGTATCGG GGATATGGTGGTAATGCAGACATGACCACGATGAATGCCATTTCACGTATTGGCGCCACGGCAGGCTCAGCTGTCGCCAG TCTGGGGGCGTTTCCGGCGTTTGATGCCATGCGGCAGGCGCTGCCGATGGTGCAGAGTATTCTGCTGATGGCGGTGTATA TCATGCTTCCGATGATACTTGCTTTTGCGGCATATGAATTCAGTACGCTGATCACGCTGACGTTTGTTGTGTTTGCGCTG AACTTTCTGACGTTCTGGTGGGAACTGGCGCGGTGGCTGGACAGCTGGATGATAACGGCGCTGTATGGTTCAGATACACA TTCGAGTCTGAATATGATGGGGCTGCAGAACACGTCGGACGATATCATCATGAACCTGGTGATGGGGACGATGTTTATTG TGTTGCCAGCAGTGTGGCTGGGGGCATTATCCTGGGCCGGAGTAAATGTCGGTGCAGCTATCACTAATGCAGCTAGAGAT GGAACAAGCGTGGCACATCAAGCAGGCTCAAGGGCTGGAGATATCGCTGGGAAAGTGAGAAACTCTTTGGGGAAAAAATA A
Upstream 100 bases:
>100_bases GGCAGAGTACCGTCTGCGTTTTGCGCGGATTTGTATGGTCAGTGCGCTGTTTTTCCTGCTGTGCGAATACGCTATTTTTT CCGCCGCGGGGGACTGAGCA
Downstream 100 bases:
>100_bases CAAATGAAATAGCGTTTGTATTTAATATAAACGCTATTAATTATTTTTATTTTGCTCTTCCCATTGCTGATACTCCCAAT AGGTACGAGAGTCTAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MTTNNYLEYFLTLLGWLVNNGLWDLLIGTGLFALPLAFKVIGIWLKVREEGADEGNKGMLSLPSIENALYGAFFVMVASC VPLVQVTLDTLKFDRSRAQTCGVWTPKAPGDTGYQGIISSLGDKTAAAPIWWVVVHKLSKGVTQAAVASIPCRPDLRQLR FEVQRTFIANRALADELQDFTNDCYSLAMYQWKQRDQGMTKDRKVLSDISWIGSSTFMQGDYGTLQSRTPRAAFPWNNAR DSGRPDTGRGGYPTCREWWNDSSVGLKKRVTEEVDEGLWLRLSAAMKLLGNSQATYQEEIIKRLVSPANLTISQGGEVYR GYGGNADMTTMNAISRIGATAGSAVASLGAFPAFDAMRQALPMVQSILLMAVYIMLPMILAFAAYEFSTLITLTFVVFAL NFLTFWWELARWLDSWMITALYGSDTHSSLNMMGLQNTSDDIIMNLVMGTMFIVLPAVWLGALSWAGVNVGAAITNAARD GTSVAHQAGSRAGDIAGKVRNSLGKK
Sequences:
>Translated_506_residues MTTNNYLEYFLTLLGWLVNNGLWDLLIGTGLFALPLAFKVIGIWLKVREEGADEGNKGMLSLPSIENALYGAFFVMVASC VPLVQVTLDTLKFDRSRAQTCGVWTPKAPGDTGYQGIISSLGDKTAAAPIWWVVVHKLSKGVTQAAVASIPCRPDLRQLR FEVQRTFIANRALADELQDFTNDCYSLAMYQWKQRDQGMTKDRKVLSDISWIGSSTFMQGDYGTLQSRTPRAAFPWNNAR DSGRPDTGRGGYPTCREWWNDSSVGLKKRVTEEVDEGLWLRLSAAMKLLGNSQATYQEEIIKRLVSPANLTISQGGEVYR GYGGNADMTTMNAISRIGATAGSAVASLGAFPAFDAMRQALPMVQSILLMAVYIMLPMILAFAAYEFSTLITLTFVVFAL NFLTFWWELARWLDSWMITALYGSDTHSSLNMMGLQNTSDDIIMNLVMGTMFIVLPAVWLGALSWAGVNVGAAITNAARD GTSVAHQAGSRAGDIAGKVRNSLGKK >Mature_505_residues TTNNYLEYFLTLLGWLVNNGLWDLLIGTGLFALPLAFKVIGIWLKVREEGADEGNKGMLSLPSIENALYGAFFVMVASCV PLVQVTLDTLKFDRSRAQTCGVWTPKAPGDTGYQGIISSLGDKTAAAPIWWVVVHKLSKGVTQAAVASIPCRPDLRQLRF EVQRTFIANRALADELQDFTNDCYSLAMYQWKQRDQGMTKDRKVLSDISWIGSSTFMQGDYGTLQSRTPRAAFPWNNARD SGRPDTGRGGYPTCREWWNDSSVGLKKRVTEEVDEGLWLRLSAAMKLLGNSQATYQEEIIKRLVSPANLTISQGGEVYRG YGGNADMTTMNAISRIGATAGSAVASLGAFPAFDAMRQALPMVQSILLMAVYIMLPMILAFAAYEFSTLITLTFVVFALN FLTFWWELARWLDSWMITALYGSDTHSSLNMMGLQNTSDDIIMNLVMGTMFIVLPAVWLGALSWAGVNVGAAITNAARDG TSVAHQAGSRAGDIAGKVRNSLGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55530; Mature: 55398
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNNYLEYFLTLLGWLVNNGLWDLLIGTGLFALPLAFKVIGIWLKVREEGADEGNKGML CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE SLPSIENALYGAFFVMVASCVPLVQVTLDTLKFDRSRAQTCGVWTPKAPGDTGYQGIISS ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH LGDKTAAAPIWWVVVHKLSKGVTQAAVASIPCRPDLRQLRFEVQRTFIANRALADELQDF HCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TNDCYSLAMYQWKQRDQGMTKDRKVLSDISWIGSSTFMQGDYGTLQSRTPRAAFPWNNAR HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCC DSGRPDTGRGGYPTCREWWNDSSVGLKKRVTEEVDEGLWLRLSAAMKLLGNSQATYQEEI CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHH IKRLVSPANLTISQGGEVYRGYGGNADMTTMNAISRIGATAGSAVASLGAFPAFDAMRQA HHHHCCCCCEEECCCCCEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHH LPMVQSILLMAVYIMLPMILAFAAYEFSTLITLTFVVFALNFLTFWWELARWLDSWMITA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYGSDTHSSLNMMGLQNTSDDIIMNLVMGTMFIVLPAVWLGALSWAGVNVGAAITNAARD HCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC GTSVAHQAGSRAGDIAGKVRNSLGKK CHHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TTNNYLEYFLTLLGWLVNNGLWDLLIGTGLFALPLAFKVIGIWLKVREEGADEGNKGML CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE SLPSIENALYGAFFVMVASCVPLVQVTLDTLKFDRSRAQTCGVWTPKAPGDTGYQGIISS ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH LGDKTAAAPIWWVVVHKLSKGVTQAAVASIPCRPDLRQLRFEVQRTFIANRALADELQDF HCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TNDCYSLAMYQWKQRDQGMTKDRKVLSDISWIGSSTFMQGDYGTLQSRTPRAAFPWNNAR HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCC DSGRPDTGRGGYPTCREWWNDSSVGLKKRVTEEVDEGLWLRLSAAMKLLGNSQATYQEEI CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHH IKRLVSPANLTISQGGEVYRGYGGNADMTTMNAISRIGATAGSAVASLGAFPAFDAMRQA HHHHCCCCCEEECCCCCEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHH LPMVQSILLMAVYIMLPMILAFAAYEFSTLITLTFVVFALNFLTFWWELARWLDSWMITA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYGSDTHSSLNMMGLQNTSDDIIMNLVMGTMFIVLPAVWLGALSWAGVNVGAAITNAARD HCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC GTSVAHQAGSRAGDIAGKVRNSLGKK CHHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA