| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218691189
Identifier: 218691189
GI number: 218691189
Start: 3465523
End: 3466230
Strand: Reverse
Name: 218691189
Synonym: ECED1_3541
Alternate gene names: NA
Gene position: 3466230-3465523 (Counterclockwise)
Preceding gene: 218691191
Following gene: 218691188
Centisome position: 66.54
GC content: 42.09
Gene sequence:
>708_bases ATGCAGTTTTACTTTGTGAACGGAAGGGGGACTGCATCTGATTTTTACAGGGAGAATGACTTTATGGCCCGGAAATCGTC ACGTTCTAAAGTTGAACTGTTTCGCAAGTCTTTCATCTCACTTGCCCGTGAGTGTGGTGGCAGTTACGCAACAACAGCTG ACAGAATGAGAATTGCAAAGTACTTCCTGAATTATTTACGCGAAAATGGAATTAAACTTCGCCAGACGAGCAGTATTAAA ACCAGACATATTTCTGGTTACCTTCTCAGCAGGAAAGCAGCGGGTATTTCTCACCGGACTATTCAGAATGAACGGGCGGT AATGCGTGCCATTTTAGAAAAAGATGGACGACTTAAAATCGCAGATCCTTCTAACCCATTATTGAGTAATGAAGCGCTCG GCCTAAAGGATACATGCCGTGATGGAAAGAAAATAGCATTGTCACCGGATGAGTTCTGGAAAACATTTGCTAAAGTGGAA AAAAAGAATCCTGGTGTGGCAGCAGCAATGCAGCTTTCTTATGTTCTGGGTTTAAGAACAAAAGAAGCAGTTCAGTCATG TAAGTCTGTTCAGTCATGGCTACGGGAACTGAATTCAGGATGCGATTCTCTTTTGGTCGTTTTTGGTACGAAAGGTGGAA GACCAAGAAATACCACAATTATTGACAGAGATGCGGTAAGACATGCTTTGCTTTATGCTCAAAAATAA
Upstream 100 bases:
>100_bases AAACGAGCCAGGAAGGCGAGCAACCGCGTTACAGAGCCGTCCGTGATGACGAAAAACTAACAATATCAACGAACTTTTCT GTTTACCGGAAGGGCTGCGT
Downstream 100 bases:
>100_bases TGGATGAACACGACGGAAAACTTATTGATCGTCCAAATATAAAACAGGCTATCAATGTTTTTCGTTATCATGCCCGTAAA GCGGGATTGTCAGGAGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Integrase
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MQFYFVNGRGTASDFYRENDFMARKSSRSKVELFRKSFISLARECGGSYATTADRMRIAKYFLNYLRENGIKLRQTSSIK TRHISGYLLSRKAAGISHRTIQNERAVMRAILEKDGRLKIADPSNPLLSNEALGLKDTCRDGKKIALSPDEFWKTFAKVE KKNPGVAAAMQLSYVLGLRTKEAVQSCKSVQSWLRELNSGCDSLLVVFGTKGGRPRNTTIIDRDAVRHALLYAQK
Sequences:
>Translated_235_residues MQFYFVNGRGTASDFYRENDFMARKSSRSKVELFRKSFISLARECGGSYATTADRMRIAKYFLNYLRENGIKLRQTSSIK TRHISGYLLSRKAAGISHRTIQNERAVMRAILEKDGRLKIADPSNPLLSNEALGLKDTCRDGKKIALSPDEFWKTFAKVE KKNPGVAAAMQLSYVLGLRTKEAVQSCKSVQSWLRELNSGCDSLLVVFGTKGGRPRNTTIIDRDAVRHALLYAQK >Mature_235_residues MQFYFVNGRGTASDFYRENDFMARKSSRSKVELFRKSFISLARECGGSYATTADRMRIAKYFLNYLRENGIKLRQTSSIK TRHISGYLLSRKAAGISHRTIQNERAVMRAILEKDGRLKIADPSNPLLSNEALGLKDTCRDGKKIALSPDEFWKTFAKVE KKNPGVAAAMQLSYVLGLRTKEAVQSCKSVQSWLRELNSGCDSLLVVFGTKGGRPRNTTIIDRDAVRHALLYAQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26512; Mature: 26512
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFYFVNGRGTASDFYRENDFMARKSSRSKVELFRKSFISLARECGGSYATTADRMRIAK CEEEEECCCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH YFLNYLRENGIKLRQTSSIKTRHISGYLLSRKAAGISHRTIQNERAVMRAILEKDGRLKI HHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEE ADPSNPLLSNEALGLKDTCRDGKKIALSPDEFWKTFAKVEKKNPGVAAAMQLSYVLGLRT ECCCCCCCCCCCCCCHHHHCCCCEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC KEAVQSCKSVQSWLRELNSGCDSLLVVFGTKGGRPRNTTIIDRDAVRHALLYAQK HHHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCCCEEECHHHHHHHHHHCCC >Mature Secondary Structure MQFYFVNGRGTASDFYRENDFMARKSSRSKVELFRKSFISLARECGGSYATTADRMRIAK CEEEEECCCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH YFLNYLRENGIKLRQTSSIKTRHISGYLLSRKAAGISHRTIQNERAVMRAILEKDGRLKI HHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEE ADPSNPLLSNEALGLKDTCRDGKKIALSPDEFWKTFAKVEKKNPGVAAAMQLSYVLGLRT ECCCCCCCCCCCCCCHHHHCCCCEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC KEAVQSCKSVQSWLRELNSGCDSLLVVFGTKGGRPRNTTIIDRDAVRHALLYAQK HHHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCCCEEECHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA