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The map label for this gene is pilV

Identifier: 218691166

GI number: 218691166

Start: 3443601

End: 3443834

Strand: Reverse

Name: pilV

Synonym: ECED1_3516

Alternate gene names: NA

Gene position: 3443834-3443601 (Counterclockwise)

Preceding gene: 218691168

Following gene: 218691164

Centisome position: 66.11

GC content: 48.29

Gene sequence:

>234_bases
ATGTCTCTGTGCCAATCCGGTTTGTGGCTTGGAGGCAATAAAGTGAACTATTCTGCCTGTAAATGGTATGAAGCGACCTC
CGCACATTTTATCGGTGGCAGAAGCGGAGGTTCTATTTATTACAAGCCGATTCAGTGCCCTGCCGGGTACGTCATGACAG
GTACAAGAATGTACGGCATCGGAGATGGTGTTGATGAAGAGCACGTCGATGCTTACTGTTGCCCTTTTGGTTAG

Upstream 100 bases:

>100_bases
GCGCCCGGTTGAGAGTCATTTTGCGAATTTTTATTTTTCGAAACATATCTGCCTTCCACGATAAATCCCAGGAAGGTAGG
AATACTGAATCAGAAATGCA

Downstream 100 bases:

>100_bases
ATTCCGGCACCAGGAAGGTTGAGGCATGTCACTGTAATTGTGCCACCGGACTCATAATTTCCCCACGCATAATTATTCAC
ATACCAAACCTTGTTTTTGT

Product: fragment of pilV protein, Shufflon protein (C-ter part)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MSLCQSGLWLGGNKVNYSACKWYEATSAHFIGGRSGGSIYYKPIQCPAGYVMTGTRMYGIGDGVDEEHVDAYCCPFG

Sequences:

>Translated_77_residues
MSLCQSGLWLGGNKVNYSACKWYEATSAHFIGGRSGGSIYYKPIQCPAGYVMTGTRMYGIGDGVDEEHVDAYCCPFG
>Mature_76_residues
SLCQSGLWLGGNKVNYSACKWYEATSAHFIGGRSGGSIYYKPIQCPAGYVMTGTRMYGIGDGVDEEHVDAYCCPFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007001 [H]

Pfam domain/function: PF04917 Shufflon_N [H]

EC number: NA

Molecular weight: Translated: 8327; Mature: 8196

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
10.4 %Cys+Met (Translated Protein)
6.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLCQSGLWLGGNKVNYSACKWYEATSAHFIGGRSGGSIYYKPIQCPAGYVMTGTRMYGI
CCCCCCCEEECCCCCCCCEEEEEECCCCEEECCCCCCEEEEEEECCCCCEEEECCEEEEC
GDGVDEEHVDAYCCPFG
CCCCCCCCCCEEEECCC
>Mature Secondary Structure 
SLCQSGLWLGGNKVNYSACKWYEATSAHFIGGRSGGSIYYKPIQCPAGYVMTGTRMYGI
CCCCCCEEECCCCCCCCEEEEEECCCCEEECCCCCCEEEEEEECCCCCEEEECCEEEEC
GDGVDEEHVDAYCCPFG
CCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3029698; 2623084 [H]