| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is ygfJ [H]
Identifier: 218691003
GI number: 218691003
Start: 3280673
End: 3281251
Strand: Direct
Name: ygfJ [H]
Synonym: ECED1_3337
Alternate gene names: 218691003
Gene position: 3280673-3281251 (Clockwise)
Preceding gene: 218691000
Following gene: 218691004
Centisome position: 62.97
GC content: 43.18
Gene sequence:
>579_bases ATGTCAGCCATCGACTGTATAATTACCGCCGCAGGATTATCATCAAGAATGGGGCAATGGAAAATGATGTTACCCTGGCA ACAGGGAACAATTCTTGATACAAGTATCAAAAATGCGTTGCAGTTTTGTAGCCGAATTATTTTAGTCACCGGCTATCGTG GTAATGAACTGCACGAACGTTATGCGAACCAGAGCAATATCACTATTATCCACAACCCAGATTATGCGCAGGGTTTACTG ACATCAGTAAAGGCCGCAGTACCCGCGGTGCAAACAGAACATTGTTTTCTCACCCACGGAGATATGCCAACCCTCACCAT CGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGA TTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAGCGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGA GAACATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGAA AAGGTATACTGAAATTTAG
Upstream 100 bases:
>100_bases TCTTTATGGACCTCTCTGGGATAAATTACCCTCAACGTAATCCATCAGGAAGTAACGCAATTATCAGGCGTTATTAGCTC CTGTAAATAATGGAATCACT
Downstream 100 bases:
>100_bases AAAACGTAGTTAAACGATTGCGTTCAAATATCTAATCCCTCCAGCACTCTTTATCATAATGATAAGGAATCACTGATTTT GAGAAAAGAGAAAAAGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MSAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLL TSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMG EHYSVEIENAEIILDIDTPDDFITAKKRYTEI
Sequences:
>Translated_192_residues MSAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLL TSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMG EHYSVEIENAEIILDIDTPDDFITAKKRYTEI >Mature_191_residues SAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLLT SVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMGE HYSVEIENAEIILDIDTPDDFITAKKRYTEI
Specific function: Unknown
COG id: COG2068
COG function: function code R; Uncharacterized MobA-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789242, Length=192, Percent_Identity=98.4375, Blast_Score=397, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017696 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21526; Mature: 21395
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHER CCHHHHEEECCCHHHCCCCEEEEECCCCCCEEHHHHHHHHHHHHHEEEEECCCCCHHHHH YANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDG HCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEHHHHHHHHHCCCCCC AILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMGEHYSVEIENAEIILDIDTPD EEEEECCCCCCCCEEEECHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCEEEEECCCCC DFITAKKRYTEI HHHHHHHHHCCC >Mature Secondary Structure SAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHER CHHHHEEECCCHHHCCCCEEEEECCCCCCEEHHHHHHHHHHHHHEEEEECCCCCHHHHH YANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDG HCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEHHHHHHHHHCCCCCC AILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMGEHYSVEIENAEIILDIDTPD EEEEECCCCCCCCEEEECHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCEEEEECCCCC DFITAKKRYTEI HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]