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The map label for this gene is yjhC [H]

Identifier: 218690975

GI number: 218690975

Start: 3252837

End: 3253940

Strand: Reverse

Name: yjhC [H]

Synonym: ECED1_3307

Alternate gene names: 218690975

Gene position: 3253940-3252837 (Counterclockwise)

Preceding gene: 218690976

Following gene: 218690974

Centisome position: 62.46

GC content: 34.87

Gene sequence:

>1104_bases
ATGATTAATTATGGCGTTGTTGGTGTTGGATATTTTGGCGCAGAATTAGCTCGTTTTATGAATATGAATGAAAATGCCAA
AATAACATGTGTTTATGATCCTGAAAATGGAGAGACTATTGCTAAAGAATTAAATTGTATAAATATGTCAACTCTGGATG
ATTTGGTTTCAAGCGAACTAGTAGATTGCGTAATTGTTGCTACTCCAAACTATTTACATAAAGAGCCAGTGATTAAAGCC
GCAAAATATAAAAAGCATGTTTTCTGTGAGAAACCAATTTCTTTAAATTATAAAGATTGTAAAGATATGGTCCATGCTTG
TAAAAACGCAGGTGTGACTTTTATGGCTGGTCATATAATGAACTTTTTTAATGGTGTTCAATATGCGAGGAAGTTAATAA
AAGATGGAGTGATTGGGAATGTTTTATCTTGCCATACAAAGAGAAATGGTTGGGAAAATAAACAGGAACATCTCTCCTGG
AAAAAGATTAAAGAGCAATCTGGTGGTCATCTTTACCATCATATACATGAATTAGATTGTGTTCAACATTTGCTGGGTGA
AAAACCTGATACTGTAACTATGATTGGAGGAAATTTAGCTCACTCTGGTCCTGGATTTGGTAATGAAGATGATATGCTAT
TTATGACGTTAGAGTTTGCGTCAGGAAAAATTGCGACATTAGAATGGGGAAGTGCTTTTAACTGGCCAGAACATTATGTA
ATTATCAATGGAACTAAAGGTTCTATAAAAATTGATATGCAGGAAACTGGGGGAACTCTCAGAGTAGGAGGTAAGACAGA
GAATTTTTTGGTCCATGAAACACAAGAGGAAGATAATGACCGTAAGAAAGGAAATTTGACGTCTGAAATGGATGGTGCTA
TCGCATATGGTCGTCCAGGTAAAAAAACACCATTATGGCTTGCCAGTTTAATAAAAAAAGAAACATTATTTCTTCATAAG
GTTTTGAGTGGTGAAAAACCTGATGATGATTATATTGATCTGCTCAATGGTGAGGCTGCTATGTCTGCAATAGCCACAGC
TGATGCAGCTACAGTTTCTAGGACTGAAAATAGAAAAGTGAAAATGATTGAGATCACTAATTAA

Upstream 100 bases:

>100_bases
TGTTACAGTTGCATTCTCTGTATTATTAATTTTATTAGTTGGTTTTGATATTCCAGGTAAAATCTATAAATTATCCGCAG
TAAAATAATTAGGAGGCTTT

Downstream 100 bases:

>100_bases
AAAAGTTATACAATTAATTTAATTATCTGGCTGGATAATATATCCAGCCAGTATTTGATATTTATCCCTAAACCACTTCC
TAAATAGCTGTTCGGAATAG

Product: putative oxidoreductase; KpLE2 phage-like element

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MINYGVVGVGYFGAELARFMNMNENAKITCVYDPENGETIAKELNCINMSTLDDLVSSELVDCVIVATPNYLHKEPVIKA
AKYKKHVFCEKPISLNYKDCKDMVHACKNAGVTFMAGHIMNFFNGVQYARKLIKDGVIGNVLSCHTKRNGWENKQEHLSW
KKIKEQSGGHLYHHIHELDCVQHLLGEKPDTVTMIGGNLAHSGPGFGNEDDMLFMTLEFASGKIATLEWGSAFNWPEHYV
IINGTKGSIKIDMQETGGTLRVGGKTENFLVHETQEEDNDRKKGNLTSEMDGAIAYGRPGKKTPLWLASLIKKETLFLHK
VLSGEKPDDDYIDLLNGEAAMSAIATADAATVSRTENRKVKMIEITN

Sequences:

>Translated_367_residues
MINYGVVGVGYFGAELARFMNMNENAKITCVYDPENGETIAKELNCINMSTLDDLVSSELVDCVIVATPNYLHKEPVIKA
AKYKKHVFCEKPISLNYKDCKDMVHACKNAGVTFMAGHIMNFFNGVQYARKLIKDGVIGNVLSCHTKRNGWENKQEHLSW
KKIKEQSGGHLYHHIHELDCVQHLLGEKPDTVTMIGGNLAHSGPGFGNEDDMLFMTLEFASGKIATLEWGSAFNWPEHYV
IINGTKGSIKIDMQETGGTLRVGGKTENFLVHETQEEDNDRKKGNLTSEMDGAIAYGRPGKKTPLWLASLIKKETLFLHK
VLSGEKPDDDYIDLLNGEAAMSAIATADAATVSRTENRKVKMIEITN
>Mature_367_residues
MINYGVVGVGYFGAELARFMNMNENAKITCVYDPENGETIAKELNCINMSTLDDLVSSELVDCVIVATPNYLHKEPVIKA
AKYKKHVFCEKPISLNYKDCKDMVHACKNAGVTFMAGHIMNFFNGVQYARKLIKDGVIGNVLSCHTKRNGWENKQEHLSW
KKIKEQSGGHLYHHIHELDCVQHLLGEKPDTVTMIGGNLAHSGPGFGNEDDMLFMTLEFASGKIATLEWGSAFNWPEHYV
IINGTKGSIKIDMQETGGTLRVGGKTENFLVHETQEEDNDRKKGNLTSEMDGAIAYGRPGKKTPLWLASLIKKETLFLHK
VLSGEKPDDDYIDLLNGEAAMSAIATADAATVSRTENRKVKMIEITN

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87082405, Length=365, Percent_Identity=87.1232876712329, Blast_Score=680, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6323975, Length=304, Percent_Identity=23.6842105263158, Blast_Score=69, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24581117, Length=224, Percent_Identity=26.3392857142857, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 40773; Mature: 40773

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINYGVVGVGYFGAELARFMNMNENAKITCVYDPENGETIAKELNCINMSTLDDLVSSEL
CCCCEEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHH
VDCVIVATPNYLHKEPVIKAAKYKKHVFCEKPISLNYKDCKDMVHACKNAGVTFMAGHIM
HEEEEEECCCHHHHCHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCEEEHHHHHH
NFFNGVQYARKLIKDGVIGNVLSCHTKRNGWENKQEHLSWKKIKEQSGGHLYHHIHELDC
HHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
VQHLLGEKPDTVTMIGGNLAHSGPGFGNEDDMLFMTLEFASGKIATLEWGSAFNWPEHYV
HHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCEE
IINGTKGSIKIDMQETGGTLRVGGKTENFLVHETQEEDNDRKKGNLTSEMDGAIAYGRPG
EEECCCCEEEEEEECCCCEEEECCCCCCEEEEECCCCCCCHHCCCCCHHCCCCEEECCCC
KKTPLWLASLIKKETLFLHKVLSGEKPDDDYIDLLNGEAAMSAIATADAATVSRTENRKV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHCHHHHCCCCCCEE
KMIEITN
EEEEECC
>Mature Secondary Structure
MINYGVVGVGYFGAELARFMNMNENAKITCVYDPENGETIAKELNCINMSTLDDLVSSEL
CCCCEEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHH
VDCVIVATPNYLHKEPVIKAAKYKKHVFCEKPISLNYKDCKDMVHACKNAGVTFMAGHIM
HEEEEEECCCHHHHCHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCEEEHHHHHH
NFFNGVQYARKLIKDGVIGNVLSCHTKRNGWENKQEHLSWKKIKEQSGGHLYHHIHELDC
HHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
VQHLLGEKPDTVTMIGGNLAHSGPGFGNEDDMLFMTLEFASGKIATLEWGSAFNWPEHYV
HHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCEE
IINGTKGSIKIDMQETGGTLRVGGKTENFLVHETQEEDNDRKKGNLTSEMDGAIAYGRPG
EEECCCCEEEEEEECCCCEEEECCCCCCEEEEECCCCCCCHHCCCCCHHCCCCEEECCCC
KKTPLWLASLIKKETLFLHKVLSGEKPDDDYIDLLNGEAAMSAIATADAATVSRTENRKV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHCHHHHCCCCCCEE
KMIEITN
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]