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The map label for this gene is Q [H]

Identifier: 218690972

GI number: 218690972

Start: 3250881

End: 3251273

Strand: Reverse

Name: Q [H]

Synonym: ECED1_3303

Alternate gene names: 218690972

Gene position: 3251273-3250881 (Counterclockwise)

Preceding gene: 218690973

Following gene: 218690970

Centisome position: 62.41

GC content: 52.42

Gene sequence:

>393_bases
GTGCGCGATATTCAACTGGTGCTTGAACGCTGGGGAGCATGGGCGGCAAATAATCATGAGGATGTGACCTGGTCGCCCAT
TGCCTCTGGATTTAAGGGGCTTATTCCGCCAAAGGTAACGTCACGTCCGCAGTGCTGCGACGATGATGCGATGATTATAT
GCGGGTGTATAGCTCGCCTTTACCGGAACAACCGCGATCTGCATGACTTGCTGGTGGATTACTACGTGCTGGGGAAAACG
TTTATGGCGCTGGCACGGAAGCATGGGTGCTCTGATGGACACATCGGAAAGCGGCTACAGAAAGCTGAAGGCGTTGTTGA
AGGCATGTTGATGATGCTGGATGTGAGCCTTGAGATGGATCGGTATGTTGAGCGTGAATCAGTGACGGCATAA

Upstream 100 bases:

>100_bases
TACATCCCTCGCAATCGAGTGATGTATTTGGCTGGTGGACCTTGCAGCAATCGGCATAAGTCATAGCACAACCTTAAACA
CATCACAGGAGGCGTAATAC

Downstream 100 bases:

>100_bases
CACGCAGAAAAAAACCGCAGTCACAAGGAGCTACGGTTGGTAAGTATGGCTTTTCAGTCACGGAAAAAGTAAGCACTGAT
GATTATGCCACGAGAGTACG

Product: Antitermination protein Q from prophage

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MRDIQLVLERWGAWAANNHEDVTWSPIASGFKGLIPPKVTSRPQCCDDDAMIICGCIARLYRNNRDLHDLLVDYYVLGKT
FMALARKHGCSDGHIGKRLQKAEGVVEGMLMMLDVSLEMDRYVERESVTA

Sequences:

>Translated_130_residues
MRDIQLVLERWGAWAANNHEDVTWSPIASGFKGLIPPKVTSRPQCCDDDAMIICGCIARLYRNNRDLHDLLVDYYVLGKT
FMALARKHGCSDGHIGKRLQKAEGVVEGMLMMLDVSLEMDRYVERESVTA
>Mature_130_residues
MRDIQLVLERWGAWAANNHEDVTWSPIASGFKGLIPPKVTSRPQCCDDDAMIICGCIARLYRNNRDLHDLLVDYYVLGKT
FMALARKHGCSDGHIGKRLQKAEGVVEGMLMMLDVSLEMDRYVERESVTA

Specific function: Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage antitermination Q type 1 family [H]

Homologues:

Organism=Escherichia coli, GI1786763, Length=127, Percent_Identity=78.740157480315, Blast_Score=216, Evalue=5e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010534 [H]

Pfam domain/function: PF06530 Phage_antitermQ [H]

EC number: NA

Molecular weight: Translated: 14699; Mature: 14699

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDIQLVLERWGAWAANNHEDVTWSPIASGFKGLIPPKVTSRPQCCDDDAMIICGCIARL
CCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
YRNNRDLHDLLVDYYVLGKTFMALARKHGCSDGHIGKRLQKAEGVVEGMLMMLDVSLEMD
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYVERESVTA
HHHHHHHCCC
>Mature Secondary Structure
MRDIQLVLERWGAWAANNHEDVTWSPIASGFKGLIPPKVTSRPQCCDDDAMIICGCIARL
CCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
YRNNRDLHDLLVDYYVLGKTFMALARKHGCSDGHIGKRLQKAEGVVEGMLMMLDVSLEMD
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYVERESVTA
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8648624; 9278503 [H]