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The map label for this gene is sacT [H]

Identifier: 218690942

GI number: 218690942

Start: 3209447

End: 3210328

Strand: Reverse

Name: sacT [H]

Synonym: ECED1_3272

Alternate gene names: 218690942

Gene position: 3210328-3209447 (Counterclockwise)

Preceding gene: 218690943

Following gene: 218690941

Centisome position: 61.62

GC content: 33.9

Gene sequence:

>882_bases
ATGTTTGAAGTAGTTATTACTTCTGACGTGCCTTGCCTTTTTTTTTGGAGCCATGGAATGATCATCGAAAAAGTCATGAA
CAATAATTGTGTACAGGCATCGATGAATGGACAGGAGGTTATCATTTCTGGGCCTGGCGTCGGTTACAACAAAAAATATG
GAATGTCGGTCCCTGAGCATCCGGCTAACCGGATTTTTTATGTCAGAAATGAACAAAAAAACAAACTTTATAAATTGATT
GAACATGTAGATATTGAGTATGTGTTTGTTGCCGAAAAAATAGTGCAATATGCGGAGAAAAATCTCGAAAAAAATCTCAA
TCCATCGCTACTATTGATTCTTGCGGATCACATTTCGAATGCAATATCCCGAGTCGTTTCAGGTATACAAATTAATAATG
TTTTCCTTGATGAAATCAAAGCGTTGTACAAAGCAGAGTATGCGATAAGTCGCGATGCATTAACTATCATTAATGAGCAA
TTCAGCGTTCAACTTCCTGATGATGAGATTGGTTTTATAGCATTGCATATTTTAAATAATTATGAAAATTCAGTTGATTA
TGAATCAGTACGGATTATTGAGTTGTCGCAAATAATCACGGAGCTTATTGAAGTTGTTTATAACAGAAAGGTGGACAGAA
GTTCATTTAACTATTCCAGATTTATGATGCACCTTAAATATTTTTCAAGTCGCGTGTTATGCAATGAAAAAATAAAACAG
AAAGATATTGGTGATATCTATGAACAGTTTCTTGAAAAGGACATTCTGTTACAGCGCGCAATTCATGAAATTGAACGGTA
TCTGTATGCCACTTTTAAATATGAATTAATTTTAGAAGAAAAACTATATCTCTCTATTCGTACCAAAGTATTAATGGACT
AA

Upstream 100 bases:

>100_bases
GGCTTGAAAAATAAGCCGACCATCTCTTTAATTAAGCACAATTCCGTGTAATGTATACGCATTAGTTAATCATCTTGTAA
CTGTTAAATCAGGCAAGGCA

Downstream 100 bases:

>100_bases
TTATATATAACATTTATATGAGATAACCCACATGAAACAAAAGAAAGCCTGGAGTTTTTTTCAGAGCCTGGGGAAGGCAT
TTATGTATCCCATTGCTCTG

Product: putative transcription antiterminator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MFEVVITSDVPCLFFWSHGMIIEKVMNNNCVQASMNGQEVIISGPGVGYNKKYGMSVPEHPANRIFYVRNEQKNKLYKLI
EHVDIEYVFVAEKIVQYAEKNLEKNLNPSLLLILADHISNAISRVVSGIQINNVFLDEIKALYKAEYAISRDALTIINEQ
FSVQLPDDEIGFIALHILNNYENSVDYESVRIIELSQIITELIEVVYNRKVDRSSFNYSRFMMHLKYFSSRVLCNEKIKQ
KDIGDIYEQFLEKDILLQRAIHEIERYLYATFKYELILEEKLYLSIRTKVLMD

Sequences:

>Translated_293_residues
MFEVVITSDVPCLFFWSHGMIIEKVMNNNCVQASMNGQEVIISGPGVGYNKKYGMSVPEHPANRIFYVRNEQKNKLYKLI
EHVDIEYVFVAEKIVQYAEKNLEKNLNPSLLLILADHISNAISRVVSGIQINNVFLDEIKALYKAEYAISRDALTIINEQ
FSVQLPDDEIGFIALHILNNYENSVDYESVRIIELSQIITELIEVVYNRKVDRSSFNYSRFMMHLKYFSSRVLCNEKIKQ
KDIGDIYEQFLEKDILLQRAIHEIERYLYATFKYELILEEKLYLSIRTKVLMD
>Mature_293_residues
MFEVVITSDVPCLFFWSHGMIIEKVMNNNCVQASMNGQEVIISGPGVGYNKKYGMSVPEHPANRIFYVRNEQKNKLYKLI
EHVDIEYVFVAEKIVQYAEKNLEKNLNPSLLLILADHISNAISRVVSGIQINNVFLDEIKALYKAEYAISRDALTIINEQ
FSVQLPDDEIGFIALHILNNYENSVDYESVRIIELSQIITELIEVVYNRKVDRSSFNYSRFMMHLKYFSSRVLCNEKIKQ
KDIGDIYEQFLEKDILLQRAIHEIERYLYATFKYELILEEKLYLSIRTKVLMD

Specific function: Mediates positive regulation of the sacPA operon by functioning as an antiterminator factor of transcription [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains [H]

Homologues:

Organism=Escherichia coli, GI1790160, Length=225, Percent_Identity=29.7777777777778, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004341
- InterPro:   IPR011608
- InterPro:   IPR001550 [H]

Pfam domain/function: PF03123 CAT_RBD; PF00874 PRD [H]

EC number: NA

Molecular weight: Translated: 34262; Mature: 34262

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEVVITSDVPCLFFWSHGMIIEKVMNNNCVQASMNGQEVIISGPGVGYNKKYGMSVPEH
CEEEEEECCCCEEEEECCCHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCC
PANRIFYVRNEQKNKLYKLIEHVDIEYVFVAEKIVQYAEKNLEKNLNPSLLLILADHISN
CCCCEEEEECCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHH
AISRVVSGIQINNVFLDEIKALYKAEYAISRDALTIINEQFSVQLPDDEIGFIALHILNN
HHHHHHCCCEECHHHHHHHHHHHHHHHHHCCCHHEEECCCEEEECCCCCCCEEEEEEHHC
YENSVDYESVRIIELSQIITELIEVVYNRKVDRSSFNYSRFMMHLKYFSSRVLCNEKIKQ
CCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KDIGDIYEQFLEKDILLQRAIHEIERYLYATFKYELILEEKLYLSIRTKVLMD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHEEEHHHHHCC
>Mature Secondary Structure
MFEVVITSDVPCLFFWSHGMIIEKVMNNNCVQASMNGQEVIISGPGVGYNKKYGMSVPEH
CEEEEEECCCCEEEEECCCHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCC
PANRIFYVRNEQKNKLYKLIEHVDIEYVFVAEKIVQYAEKNLEKNLNPSLLLILADHISN
CCCCEEEEECCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHH
AISRVVSGIQINNVFLDEIKALYKAEYAISRDALTIINEQFSVQLPDDEIGFIALHILNN
HHHHHHCCCEECHHHHHHHHHHHHHHHHHCCCHHEEECCCEEEECCCCCCCEEEEEEHHC
YENSVDYESVRIIELSQIITELIEVVYNRKVDRSSFNYSRFMMHLKYFSSRVLCNEKIKQ
CCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KDIGDIYEQFLEKDILLQRAIHEIERYLYATFKYELILEEKLYLSIRTKVLMD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2163394; 7934828; 9384377 [H]