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The map label for this gene is lemA [H]

Identifier: 218690897

GI number: 218690897

Start: 3160425

End: 3161027

Strand: Direct

Name: lemA [H]

Synonym: ECED1_3226

Alternate gene names: 218690897

Gene position: 3160425-3161027 (Clockwise)

Preceding gene: 218690895

Following gene: 218690898

Centisome position: 60.67

GC content: 41.13

Gene sequence:

>603_bases
ATGTTTAGAATATTCATCGCGTTTATATTTATTTTCAATTTATCAGGTTGCGGTTATAACGATATTCAAACCTATGATGA
ACAGGTTAATGCCTCCTGGTCAGAAGTATTAAATCAATATCAACGTCGCACCGATCTTATTCCTAATCTTGTCGCTAGTA
TTAAAGGTTACTCCAGCCATGAACAAGAGGTACTAGAAGCCGTAACATTGGCACGTAGTCAGGCTAATCGCGCCAGTAGC
GATCTTCAGAAAACTCCGGGAGATGAACAAAAATTACAAGCCTGGCAACAGGCGCAGGCGCAGGTGACTCGCACTCTCGG
GCAGTTAACGATTATTAGTGAGCGTTACCCTCAGTTAAAGGCTCAAGAGCTCTATCAAAACTTAATGGTACAGCTCGAAG
GAAGTGAAAATAGAATTGCCGTTGCGCGAGGAAGATATATTAAAGCCATTGAACAATATAATGTCACTATCCGCAAATTC
CCCGCTGTATTAACCGCAAAGGTCATGGATTACACACCAAAGAAAAATTATTTGCCGGATGATGTCACCGCAGTAAGTAA
AGCCCCAACAATAGATTTTAGCCAGAATGCTAATGCTCATTAA

Upstream 100 bases:

>100_bases
CTGTTACAGGCAGGTTTGATGCAAAAATTGGCTCAGATCATTAAGAATAAAATGAAGCGGCGTATTATGTTTTCAAGGAT
TAAATGAAAGGGATTTAAAC

Downstream 100 bases:

>100_bases
GCGGGGACGTTCTATGCGAAATTTTATCTTCCTTATGGCTTTCTTCTGTTCATCTGTGTTTGCTACACAAATTCCAGTAC
CTGAATCACCCAGGTATGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MFRIFIAFIFIFNLSGCGYNDIQTYDEQVNASWSEVLNQYQRRTDLIPNLVASIKGYSSHEQEVLEAVTLARSQANRASS
DLQKTPGDEQKLQAWQQAQAQVTRTLGQLTIISERYPQLKAQELYQNLMVQLEGSENRIAVARGRYIKAIEQYNVTIRKF
PAVLTAKVMDYTPKKNYLPDDVTAVSKAPTIDFSQNANAH

Sequences:

>Translated_200_residues
MFRIFIAFIFIFNLSGCGYNDIQTYDEQVNASWSEVLNQYQRRTDLIPNLVASIKGYSSHEQEVLEAVTLARSQANRASS
DLQKTPGDEQKLQAWQQAQAQVTRTLGQLTIISERYPQLKAQELYQNLMVQLEGSENRIAVARGRYIKAIEQYNVTIRKF
PAVLTAKVMDYTPKKNYLPDDVTAVSKAPTIDFSQNANAH
>Mature_200_residues
MFRIFIAFIFIFNLSGCGYNDIQTYDEQVNASWSEVLNQYQRRTDLIPNLVASIKGYSSHEQEVLEAVTLARSQANRASS
DLQKTPGDEQKLQAWQQAQAQVTRTLGQLTIISERYPQLKAQELYQNLMVQLEGSENRIAVARGRYIKAIEQYNVTIRKF
PAVLTAKVMDYTPKKNYLPDDVTAVSKAPTIDFSQNANAH

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 22741; Mature: 22741

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRIFIAFIFIFNLSGCGYNDIQTYDEQVNASWSEVLNQYQRRTDLIPNLVASIKGYSSH
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EQEVLEAVTLARSQANRASSDLQKTPGDEQKLQAWQQAQAQVTRTLGQLTIISERYPQLK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AQELYQNLMVQLEGSENRIAVARGRYIKAIEQYNVTIRKFPAVLTAKVMDYTPKKNYLPD
HHHHHHHHHEEECCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
DVTAVSKAPTIDFSQNANAH
HHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFRIFIAFIFIFNLSGCGYNDIQTYDEQVNASWSEVLNQYQRRTDLIPNLVASIKGYSSH
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EQEVLEAVTLARSQANRASSDLQKTPGDEQKLQAWQQAQAQVTRTLGQLTIISERYPQLK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AQELYQNLMVQLEGSENRIAVARGRYIKAIEQYNVTIRKFPAVLTAKVMDYTPKKNYLPD
HHHHHHHHHEEECCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
DVTAVSKAPTIDFSQNANAH
HHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]