| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yfiK [H]
Identifier: 218690694
GI number: 218690694
Start: 2972273
End: 2972860
Strand: Direct
Name: yfiK [H]
Synonym: ECED1_3009
Alternate gene names: 218690694
Gene position: 2972273-2972860 (Clockwise)
Preceding gene: 218690692
Following gene: 218690696
Centisome position: 57.05
GC content: 50.17
Gene sequence:
>588_bases GTGACACCGACCCTTTTAAGTGCTTTTTGGACTTACACCCTGATTACCGCCATGACGCCAGGACCGAACAATATTCTCGC CCTTAGCTCAGCTACAACGCACGGATTTCGTCAGAGTACTCGCGTGCTGGCAGGGATGAGTCTGGGATTTTTAATCGTCA TGTTGCTATGCGCGGGAATTTCGTTTTCACTGGCTGTTATCGACCCGGCAGCAGTGCATCTGTTGAGTTGGGCGGGGGCG GCATATATTGTCTGGCTGGCGTGGAAAATCGTTACCAGTCCAACAAAGGAAGATGGGCTTCAGACAAAACCAATCAGTTT TTGGGCCAGCTTTGCTTTGCAGTTTGTGAACGTCAAAATCATTTTGTATGGCATTACAGCACTGTCGACGTTTGTCCTGC CGCAAACGCAGGCGCTAAGCTGGATAATTGGCGTCAGCGTTTTGCTGGCGATGATTGGGACGTTTGGCAATGTGTGCTGG GCGCTGGCGGGGCACCTTTTTCAGCGATTGTTTCGCCAGTATGGTTGCCAGTTGAATATCGTGCTTGCACTGTTGCTAGT CTATTGCGCGGTACGCATTTTCTATTAA
Upstream 100 bases:
>100_bases CCCCAAACCTATCGAAAATATCGAATTTAGAATGTAAAAACATTCATTTTTTTAAATGTTCCGTGTCGGGTACTGTCTAC CAAAACAGAGGAGATAACAA
Downstream 100 bases:
>100_bases CGAAAAAAAGCGGAAGAAGTCGCCCTCTTCCGCTTAGTAACTTGCTACTTAAGCCTTACAGGCTTTCAGTAAAGGTACGA GCAATAACGTCGCGCTGCTG
Product: neutral amino-acid efflux protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTPTLLSAFWTYTLITAMTPGPNNILALSSATTHGFRQSTRVLAGMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGA AYIVWLAWKIVTSPTKEDGLQTKPISFWASFALQFVNVKIILYGITALSTFVLPQTQALSWIIGVSVLLAMIGTFGNVCW ALAGHLFQRLFRQYGCQLNIVLALLLVYCAVRIFY
Sequences:
>Translated_195_residues MTPTLLSAFWTYTLITAMTPGPNNILALSSATTHGFRQSTRVLAGMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGA AYIVWLAWKIVTSPTKEDGLQTKPISFWASFALQFVNVKIILYGITALSTFVLPQTQALSWIIGVSVLLAMIGTFGNVCW ALAGHLFQRLFRQYGCQLNIVLALLLVYCAVRIFY >Mature_194_residues TPTLLSAFWTYTLITAMTPGPNNILALSSATTHGFRQSTRVLAGMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGAA YIVWLAWKIVTSPTKEDGLQTKPISFWASFALQFVNVKIILYGITALSTFVLPQTQALSWIIGVSVLLAMIGTFGNVCWA LAGHLFQRLFRQYGCQLNIVLALLLVYCAVRIFY
Specific function: Exporter of O-acetylserine (OAS) and cysteine [H]
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI1788932, Length=195, Percent_Identity=96.4102564102564, Blast_Score=378, Evalue=1e-106,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 21310; Mature: 21178
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTLLSAFWTYTLITAMTPGPNNILALSSATTHGFRQSTRVLAGMSLGFLIVMLLCAGI CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC SFSLAVIDPAAVHLLSWAGAAYIVWLAWKIVTSPTKEDGLQTKPISFWASFALQFVNVKI CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ILYGITALSTFVLPQTQALSWIIGVSVLLAMIGTFGNVCWALAGHLFQRLFRQYGCQLNI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VLALLLVYCAVRIFY HHHHHHHHHHHHHCC >Mature Secondary Structure TPTLLSAFWTYTLITAMTPGPNNILALSSATTHGFRQSTRVLAGMSLGFLIVMLLCAGI CHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC SFSLAVIDPAAVHLLSWAGAAYIVWLAWKIVTSPTKEDGLQTKPISFWASFALQFVNVKI CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ILYGITALSTFVLPQTQALSWIIGVSVLLAMIGTFGNVCWALAGHLFQRLFRQYGCQLNI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VLALLLVYCAVRIFY HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA