| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yfeX [H]
Identifier: 218690566
GI number: 218690566
Start: 2820704
End: 2821603
Strand: Reverse
Name: yfeX [H]
Synonym: ECED1_2873
Alternate gene names: 218690566
Gene position: 2821603-2820704 (Counterclockwise)
Preceding gene: 218690567
Following gene: 218690563
Centisome position: 54.16
GC content: 55.78
Gene sequence:
>900_bases ATGTCTCAGGTTCAGAGTGGCATTTTGCCAGAACATTGCCGCGCGGCGATTTGGATCGAAGCCAACGTGAAAGGGGAAGT TGACGCCCTGCGTGCGGCCAGTAAAACATTTGCCGACAAACTGGCAACTTTTGAAGCGAAATTCCCGGACGCGCATCTTG GTGCGGTGGTTGCCTTTGGTAACAATACCTGGCGCGCTCTGAGCGGCGGCGTTGGGGCCGAAGAGCTGAAAGATTTTCCG GGCTACGGTAAAGGTCTTGCACCGACGACCCAGTTCGATGTGTTGATCCACATTCTTTCTCTGCGTCACGACGTGAACTT CTCTGTCGCTCAGGCGGCGATGGAAGCCTTTGGTGACTGCATTGAAGTGAAAGAAGAGATCCACGGCTTCCGTTGGGTTG AAGAGCGTGACCTGAGCGGCTTTGTTGACGGTACAGAAAACCCGGCGGGTGAAGAGACGCGCCGCGAAGTGGCTGTTATC AAAGACGGCGTGGATGCGGGCGGCAGCTATGTGTTTGTGCAGCGTTGGGAGCACAACCTGAAGCAGCTCAATCGGATGAG CGTTCACGATCAAGAGATGATGATCGGGCGCACCAAAGAGGCCAACGAAGAGATTGACGGCGACGAACGTCCGGAAACCT CTCACCTGACCCGCGTTGATCTGAAAGAAGATGGCAAAGGGCTGAAGATTGTTCGTCAGAGCCTGCCGTACGGCACCGCC AGTGGCACTCACGGTCTGTACTTCTGCGCCTACTGCGCGCGTCTGCATAACATTGAGCAGCAACTGCTGAGCATGTTTGG CGATACCGATGGTAAGCGTGATGCGATGCTGCGTTTCACCAAACCGGTCACCGGCGGCTATTACTTCGCGCCGTCGCTGG ACAAGTTGATGGCGCTGTAA
Upstream 100 bases:
>100_bases GTTAATTTGCGTCTGAACAAACCGCCGCCGCGAAAAAACACGTAAAATAGCGCCCAACAATGCCACGGATTGCGTGGCAT TATTATTTTCAGGAGGAACA
Downstream 100 bases:
>100_bases GCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACACAACTGACTGGCCTTTTTATTACTGCTTTAACGCCGCATACA CTTGATCAACTACTTTCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATFEAKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFP GYGKGLAPTTQFDVLIHILSLRHDVNFSVAQAAMEAFGDCIEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVI KDGVDAGGSYVFVQRWEHNLKQLNRMSVHDQEMMIGRTKEANEEIDGDERPETSHLTRVDLKEDGKGLKIVRQSLPYGTA SGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAMLRFTKPVTGGYYFAPSLDKLMAL
Sequences:
>Translated_299_residues MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATFEAKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFP GYGKGLAPTTQFDVLIHILSLRHDVNFSVAQAAMEAFGDCIEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVI KDGVDAGGSYVFVQRWEHNLKQLNRMSVHDQEMMIGRTKEANEEIDGDERPETSHLTRVDLKEDGKGLKIVRQSLPYGTA SGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAMLRFTKPVTGGYYFAPSLDKLMAL >Mature_298_residues SQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATFEAKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFPG YGKGLAPTTQFDVLIHILSLRHDVNFSVAQAAMEAFGDCIEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVIK DGVDAGGSYVFVQRWEHNLKQLNRMSVHDQEMMIGRTKEANEEIDGDERPETSHLTRVDLKEDGKGLKIVRQSLPYGTAS GTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAMLRFTKPVTGGYYFAPSLDKLMAL
Specific function: Unknown
COG id: COG2837
COG function: function code P; Predicted iron-dependent peroxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DyP-type peroxidase family [H]
Homologues:
Organism=Escherichia coli, GI87082102, Length=299, Percent_Identity=99.6655518394649, Blast_Score=621, Evalue=1e-179,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 - InterPro: IPR006314 [H]
Pfam domain/function: PF04261 Dyp_perox [H]
EC number: NA
Molecular weight: Translated: 33085; Mature: 32953
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATFEAKFPDAHLGAVVAFG CCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC NNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLRHDVNFSVAQAAMEAFGDC CCCCCHHCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVIKDGVDAGGSYVFVQRWEHNL HHHHHHHCCHHCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHH KQLNRMSVHDQEMMIGRTKEANEEIDGDERPETSHLTRVDLKEDGKGLKIVRQSLPYGTA HHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCHHHHHHHHCCCCCC SGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAMLRFTKPVTGGYYFAPSLDKLMAL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCEEECCCHHHHHCC >Mature Secondary Structure SQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATFEAKFPDAHLGAVVAFG CCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC NNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLRHDVNFSVAQAAMEAFGDC CCCCCHHCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVIKDGVDAGGSYVFVQRWEHNL HHHHHHHCCHHCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHH KQLNRMSVHDQEMMIGRTKEANEEIDGDERPETSHLTRVDLKEDGKGLKIVRQSLPYGTA HHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCHHHHHHHHCCCCCC SGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAMLRFTKPVTGGYYFAPSLDKLMAL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCEEECCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]