Click here to switch to the map view.

The map label for this gene is ypeB

Identifier: 218690548

GI number: 218690548

Start: 2802330

End: 2802548

Strand: Reverse

Name: ypeB

Synonym: ECED1_2854

Alternate gene names: 218690548

Gene position: 2802548-2802330 (Counterclockwise)

Preceding gene: 218690549

Following gene: 218690546

Centisome position: 53.8

GC content: 52.05

Gene sequence:

>219_bases
ATGGAAAAAGAGCAGCTGATTGAAATAGCCAATACGATAATGCCGTTTGGCAAGTACAAAGGGCGTCGCTTAATCGACCT
GCCGGAGGAGTATCTGCTGTGGTTTGCCCGCAAAGATGAGTTCCCGGCAGGGAAGCTCGGTGAGCTAATGCAAATCACGC
TGCTGATTAAAACCGAGGGGCTGACGCAACTGGTCCAGCCCCTGAAGCGTCCGCTTTAA

Upstream 100 bases:

>100_bases
ATAGCGGGTGAAGCTGCAGGATCTAAACTGGCGAAGGCGCAGGAACTGGGCATTGAAGTCATCGACGAAACGGAAATGCT
GCGTTTGCTGGGTAGCTGAG

Downstream 100 bases:

>100_bases
GCTTTATCGGCGCTGCTTTCCTGCTGCGCCTGTAACTGTTCGGTCTGGCGTTTGTATCGACGCGCCAGCACCGCACAGAC
CATCAATTGGATCTGATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MEKEQLIEIANTIMPFGKYKGRRLIDLPEEYLLWFARKDEFPAGKLGELMQITLLIKTEGLTQLVQPLKRPL

Sequences:

>Translated_72_residues
MEKEQLIEIANTIMPFGKYKGRRLIDLPEEYLLWFARKDEFPAGKLGELMQITLLIKTEGLTQLVQPLKRPL
>Mature_72_residues
MEKEQLIEIANTIMPFGKYKGRRLIDLPEEYLLWFARKDEFPAGKLGELMQITLLIKTEGLTQLVQPLKRPL

Specific function: Unknown

COG id: COG3530

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082098, Length=72, Percent_Identity=100, Blast_Score=143, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPEB_ECO57 (P0AD41)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   E85883
- RefSeq:   NP_288972.1
- ProteinModelPortal:   P0AD41
- EnsemblBacteria:   EBESCT00000027874
- EnsemblBacteria:   EBESCT00000058679
- GeneID:   957623
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z3676
- GeneTree:   EBGT00050000010846
- HOGENOM:   HBG367155
- OMA:   QMPFGKY
- ProtClustDB:   CLSK868114

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8415; Mature: 8415

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKEQLIEIANTIMPFGKYKGRRLIDLPEEYLLWFARKDEFPAGKLGELMQITLLIKTEG
CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCC
LTQLVQPLKRPL
HHHHHHHHHCCC
>Mature Secondary Structure
MEKEQLIEIANTIMPFGKYKGRRLIDLPEEYLLWFARKDEFPAGKLGELMQITLLIKTEG
CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCC
LTQLVQPLKRPL
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796