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The map label for this gene is yfcO [H]

Identifier: 218690492

GI number: 218690492

Start: 2735826

End: 2736683

Strand: Reverse

Name: yfcO [H]

Synonym: ECED1_2796

Alternate gene names: 218690492

Gene position: 2736683-2735826 (Counterclockwise)

Preceding gene: 218690493

Following gene: 218690490

Centisome position: 52.53

GC content: 49.65

Gene sequence:

>858_bases
TTGAGTACATATAAAATGAAAATATTCCGATGGTTGTGCTGCCTGGTCATGCTGACTTGCGCAGCAGAAAGTCTGGCAGC
GAAGAAAATTGCGACATTGGTGACCCCGGTGGCATATTCGGGGTATCTAACACAGATACGTTATTATCTTGAAATTCTGA
CCCCTGAAGGGGTTGAGTATGGCGTTTATAAGCAACACAGTATTGTGCTTCAAGCTGAGAATTTAGATTTAGTTTCCTGG
ACAGGGAGTACCGCCGCACCGACGTTGAAAATGGAGGAGCTCAATGATGCTTCAAAATCTACCTGTGTTGGTCTTGACGC
GTATGATGCTCGGTCGAGTAAATCTGATTGGATCTGTTACAACGCCAGCCTCGGAGTGTACTATGATGGTGAGGTGCACG
GTTGCCCGTGGTTGATCTCGACATATACTGACAGCAATATCTCTTCGGTAGATGGTGTTGGTCTATATATTGGCCCCAAA
GTTCACAACTCATCATGCCCCGTCTCCGTCGCCGCTTATGATATTTCGTGGAGTGAAGATTATGTTGTCCATTCGAAAGT
GCTGTCACTGCAATCGACGGGTGGAACGATTGAGAAAACGCTGCCCACCTTTTTGATGGAAAGCGGCAAGCTCTGTGACG
GCAGCGTGATGGACGATCGAGGCGCATACTGCCGCTTTGTGGCGCAGATGATCACCTTCTCCACCTCCGGCTGTGACAGT
TCGAAAGTGACGGTCACACCCAACCAGCATCCCATCACTGACAAGCAACTGCACGACATGGTAGTGCGTGTCGATACCAG
CAGCCGCCAGCCGATTGATTCCACCTGCCGCTTCCAGTACACGCTCAACGAGCTGTAG

Upstream 100 bases:

>100_bases
AGTAACGGCAATAACAATCTGAATTTTAATGCCTGGCTCCAGGCGAAAAGCGGCCGGGAAGTGACGATGGGGGATTTTAC
CGCCTCCCTGACTGCGACAT

Downstream 100 bases:

>100_bases
CGTATACACCACACACGATGCGGGGCCATCTGGTCCCGTTGTCCGTTATGTCATGCGGTCATCCAGTTTTTTAGAATATT
CGCCACCACAGGAGCGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSTYKMKIFRWLCCLVMLTCAAESLAAKKIATLVTPVAYSGYLTQIRYYLEILTPEGVEYGVYKQHSIVLQAENLDLVSW
TGSTAAPTLKMEELNDASKSTCVGLDAYDARSSKSDWICYNASLGVYYDGEVHGCPWLISTYTDSNISSVDGVGLYIGPK
VHNSSCPVSVAAYDISWSEDYVVHSKVLSLQSTGGTIEKTLPTFLMESGKLCDGSVMDDRGAYCRFVAQMITFSTSGCDS
SKVTVTPNQHPITDKQLHDMVVRVDTSSRQPIDSTCRFQYTLNEL

Sequences:

>Translated_285_residues
MSTYKMKIFRWLCCLVMLTCAAESLAAKKIATLVTPVAYSGYLTQIRYYLEILTPEGVEYGVYKQHSIVLQAENLDLVSW
TGSTAAPTLKMEELNDASKSTCVGLDAYDARSSKSDWICYNASLGVYYDGEVHGCPWLISTYTDSNISSVDGVGLYIGPK
VHNSSCPVSVAAYDISWSEDYVVHSKVLSLQSTGGTIEKTLPTFLMESGKLCDGSVMDDRGAYCRFVAQMITFSTSGCDS
SKVTVTPNQHPITDKQLHDMVVRVDTSSRQPIDSTCRFQYTLNEL
>Mature_284_residues
STYKMKIFRWLCCLVMLTCAAESLAAKKIATLVTPVAYSGYLTQIRYYLEILTPEGVEYGVYKQHSIVLQAENLDLVSWT
GSTAAPTLKMEELNDASKSTCVGLDAYDARSSKSDWICYNASLGVYYDGEVHGCPWLISTYTDSNISSVDGVGLYIGPKV
HNSSCPVSVAAYDISWSEDYVVHSKVLSLQSTGGTIEKTLPTFLMESGKLCDGSVMDDRGAYCRFVAQMITFSTSGCDSS
KVTVTPNQHPITDKQLHDMVVRVDTSSRQPIDSTCRFQYTLNEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To S.typhimurium yadU [H]

Homologues:

Organism=Escherichia coli, GI87082086, Length=289, Percent_Identity=49.1349480968858, Blast_Score=252, Evalue=2e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021407 [H]

Pfam domain/function: PF11245 DUF2544 [H]

EC number: NA

Molecular weight: Translated: 31424; Mature: 31293

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTYKMKIFRWLCCLVMLTCAAESLAAKKIATLVTPVAYSGYLTQIRYYLEILTPEGVEY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEE
GVYKQHSIVLQAENLDLVSWTGSTAAPTLKMEELNDASKSTCVGLDAYDARSSKSDWICY
CEEECEEEEEEECCCEEEEECCCCCCCEEEHHHCCCCCCCEEEECCCCCCCCCCCCEEEE
NASLGVYYDGEVHGCPWLISTYTDSNISSVDGVGLYIGPKVHNSSCPVSVAAYDISWSED
ECCCCEEECCCCCCCCEEEEEECCCCCCCCCCEEEEECCEECCCCCCEEEEEEEECCCCC
YVVHSKVLSLQSTGGTIEKTLPTFLMESGKLCDGSVMDDRGAYCRFVAQMITFSTSGCDS
EEEEHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
SKVTVTPNQHPITDKQLHDMVVRVDTSSRQPIDSTCRFQYTLNEL
CEEEECCCCCCCCHHHHEEEEEEEECCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
STYKMKIFRWLCCLVMLTCAAESLAAKKIATLVTPVAYSGYLTQIRYYLEILTPEGVEY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEE
GVYKQHSIVLQAENLDLVSWTGSTAAPTLKMEELNDASKSTCVGLDAYDARSSKSDWICY
CEEECEEEEEEECCCEEEEECCCCCCCEEEHHHCCCCCCCEEEECCCCCCCCCCCCEEEE
NASLGVYYDGEVHGCPWLISTYTDSNISSVDGVGLYIGPKVHNSSCPVSVAAYDISWSED
ECCCCEEECCCCCCCCEEEEEECCCCCCCCCCEEEEECCEECCCCCCEEEEEEEECCCCC
YVVHSKVLSLQSTGGTIEKTLPTFLMESGKLCDGSVMDDRGAYCRFVAQMITFSTSGCDS
EEEEHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
SKVTVTPNQHPITDKQLHDMVVRVDTSSRQPIDSTCRFQYTLNEL
CEEEECCCCCCCCHHHHEEEEEEEECCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]