| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yfaA [H]
Identifier: 218690393
GI number: 218690393
Start: 2625341
End: 2627029
Strand: Reverse
Name: yfaA [H]
Synonym: ECED1_2696
Alternate gene names: 218690393
Gene position: 2627029-2625341 (Counterclockwise)
Preceding gene: 218690394
Following gene: 218690392
Centisome position: 50.43
GC content: 50.56
Gene sequence:
>1689_bases ATGAGTGGTGAAAAAAAGGCGAAAGGCTGGCGGTTTTATGGCCTTGTTGGTTTTGGGGCAATAGCGCTGCTATCCGCTGG CGTATGGGCATTACAATACTCTGGCAGTGGGCCAGAAAAAACGTTGTCGCCACTGGTGGTGCACAACAATCTGCAAATCG ATCTCAATGAGCCGGACCTCTTTCTCGACAGCGACTCTCTGAGCCAGCTTCCCAACGATCTCCTTACCATTCCGTTTCTC CACGATGTTCTGAGCGAAGATTTCGTTTTCTATTATCAGAATCATGCCGATCGTCTGGGCATTGAAGGCAGCATTCGCCG CATTGTCTATGAACACGATCTCACGCTGAAAGATAAGCTCTTTTCGTCACTCTTAGATCAGCCTGCGCAGGCGGCGCTAT GGCACGATAAACAAGGCCATCTTTCACATTACATGGTGCTGATCCAGCGCAGTGGTTTAAGCAAACTGCTGGAGCCATTG TTGTTTGCCGCTACCAGCGACAGCCAGTTAAGCAAGACGGAAATTAGTAGCATCAAGATAAATAGTGAAACTATTCCTGT TTATCAGTTGCGCTATAACGGCAATAACGTCCTGATGTTTGCGACTTATCAGGACAAAATATTGGCGTTTTCCAGTTCGG ATATGCTATTTAAAGATGACCAACAGGATACCGAAGCTACGGCGATCGCAAGTGATTTGTTGAGTGGTAAAAAACGCTGG GAAACCCGCTTTGGCCTGGAAGCGCGTACTGCCGAAAAAACGCCAGTACGCCAGCGCATCGTAGTCAGCGCCAGGTTGCT GGGGTTTGGCTACCAGCGATTAATGCCTTCTTTTGCTGGCGTGCGCTTCGAAATGGGTAACGACGGCTGGCACAGTTTTC TGGCGTTAAACGATGAATCCGCCAGCGTAGATGCCAGTTTCGATTTTACGCCGGTATGGAACAGTATGCCTGCCGGAGCC AGCTTCTGTGTGGCGGTGCCGTATTCACACGGTATTGCCGAAGAGATGCTTTCGCACATCAGCCAGGAAAACGACAAGCT GAATGGGGCGTTAGACGGTGGCGCCGGGCTGTGCTGGTATGAAGACTCAAAATTACAAACCCCGCTATTTGTTGGTCAGT TTGATGGCACTGCCGAACAGGCGCAATTGCCAGGGAAACTGTTTACGCAAAATATTGGTGCGCACGAAAGCAAAGCGCCA GAAGGTGTTTTGCCGGTAAGCCAGACTCAGCAGGGCGAAGCGCAAATCTGGCGTCGCGAAGTGAGTTCCCGATACGGTCA GTATCCGAAAGCGCAGGCGGCGCAACCCGATCAATTAATGTCGGATTATTTTTTCCGCGTGTCGCTGGCGATGCAAAACA AAACGCTGCTTTTCTCCCTCGATGACACGCTGGTTAATAACGCCCTGCAAGCACTGAATAAAACCCGCCCGGCAATGGTG GATGTAATACCCACTGATGGCATCGTTCCGCTCTATATCAATCCACAAGGAATGGCGAAACTGCTGCGTAACGAAACGCT GACCAGTCTGCCGAAGAATCTCGAACCGGTTTTTTATAACGCCGCACAAACTTTATTAATGCCGAAGCTGGACGCTTTAT CTCAACAACCGCGTTATGTCATGAAGCTGGCCCAGATGGAACCCGGTGCCGCCTGGCAGTGGCTACCCATAACCTGGCAA CCGCTATGA
Upstream 100 bases:
>100_bases AAAGTCCAGGCTGTAAAGTCTGGGCTTTTGTCGTATTAGGGCGCGGTAAAGTTTGGCTGTGCCCGTAAAAAATGGCTGGC TATACACAAGGAATGTGGCA
Downstream 100 bases:
>100_bases GACACGGGCTGCTGGTGCTGATTTGCTGGCTGTATTGTGTTGTTGCCCATAGTGAAATGCTAAATGTCGAACAATCCGGG CTGTTTCGCGCGTGGTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYSGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPNDLLTIPFL HDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPL LFAATSDSQLSKTEISSIKINSETIPVYQLRYNGNNVLMFATYQDKILAFSSSDMLFKDDQQDTEATAIASDLLSGKKRW ETRFGLEARTAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMGNDGWHSFLALNDESASVDASFDFTPVWNSMPAGA SFCVAVPYSHGIAEEMLSHISQENDKLNGALDGGAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAP EGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQALNKTRPAMV DVIPTDGIVPLYINPQGMAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQ PL
Sequences:
>Translated_562_residues MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYSGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPNDLLTIPFL HDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPL LFAATSDSQLSKTEISSIKINSETIPVYQLRYNGNNVLMFATYQDKILAFSSSDMLFKDDQQDTEATAIASDLLSGKKRW ETRFGLEARTAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMGNDGWHSFLALNDESASVDASFDFTPVWNSMPAGA SFCVAVPYSHGIAEEMLSHISQENDKLNGALDGGAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAP EGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQALNKTRPAMV DVIPTDGIVPLYINPQGMAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQ PL >Mature_561_residues SGEKKAKGWRFYGLVGFGAIALLSAGVWALQYSGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPNDLLTIPFLH DVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLL FAATSDSQLSKTEISSIKINSETIPVYQLRYNGNNVLMFATYQDKILAFSSSDMLFKDDQQDTEATAIASDLLSGKKRWE TRFGLEARTAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMGNDGWHSFLALNDESASVDASFDFTPVWNSMPAGAS FCVAVPYSHGIAEEMLSHISQENDKLNGALDGGAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPE GVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQALNKTRPAMVD VIPTDGIVPLYINPQGMAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQP L
Specific function: Unknown
COG id: COG4685
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082069, Length=562, Percent_Identity=96.9750889679715, Blast_Score=1130, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018671 [H]
Pfam domain/function: PF09909 DUF2138 [H]
EC number: NA
Molecular weight: Translated: 62643; Mature: 62512
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYSGSGPEKTLSPLVVHNNLQIDLNEPDL CCCCCCCCCEEEEEHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEECCEEEEECCCCE FLDSDSLSQLPNDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKL EECCCHHHHCCHHHEEHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHH FSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKI HHHHHCCCHHHHHCCCCCCCHHHEEEEHHHCCHHHHHHHHHEECCCCCCCCCEECCEEEE NSETIPVYQLRYNGNNVLMFATYQDKILAFSSSDMLFKDDQQDTEATAIASDLLSGKKRW CCCCCEEEEEEECCCEEEEEEEECCEEEEECCCCCEEECCCCCHHHHHHHHHHHCCHHHH ETRFGLEARTAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMGNDGWHSFLALNDES HHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCEEEEECCCCCEEEEEECCCC ASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGGAGLCWY CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCEEEEE EDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRRE ECCCCCCCEEEEECCCCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH VSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQALNKTRPAMV HHHHHCCCCCCCCCCHHHHHHHHHEEEEEEECCCEEEEEECHHHHHHHHHHHHCCCCCEE DVIPTDGIVPLYINPQGMAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYV EEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHCCCCHHH MKLAQMEPGAAWQWLPITWQPL HHHHHCCCCCCEEEECEEECCC >Mature Secondary Structure SGEKKAKGWRFYGLVGFGAIALLSAGVWALQYSGSGPEKTLSPLVVHNNLQIDLNEPDL CCCCCCCCEEEEEHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEECCEEEEECCCCE FLDSDSLSQLPNDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKL EECCCHHHHCCHHHEEHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHH FSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKI HHHHHCCCHHHHHCCCCCCCHHHEEEEHHHCCHHHHHHHHHEECCCCCCCCCEECCEEEE NSETIPVYQLRYNGNNVLMFATYQDKILAFSSSDMLFKDDQQDTEATAIASDLLSGKKRW CCCCCEEEEEEECCCEEEEEEEECCEEEEECCCCCEEECCCCCHHHHHHHHHHHCCHHHH ETRFGLEARTAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMGNDGWHSFLALNDES HHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCEEEEECCCCCEEEEEECCCC ASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGGAGLCWY CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCEEEEE EDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRRE ECCCCCCCEEEEECCCCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH VSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQALNKTRPAMV HHHHHCCCCCCCCCCHHHHHHHHHEEEEEEECCCEEEEEECHHHHHHHHHHHHCCCCCEE DVIPTDGIVPLYINPQGMAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYV EEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHCCCCHHH MKLAQMEPGAAWQWLPITWQPL HHHHHCCCCCCEEEECEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 2834621 [H]