| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yohF [H]
Identifier: 218690285
GI number: 218690285
Start: 2508835
End: 2509596
Strand: Reverse
Name: yohF [H]
Synonym: ECED1_2583
Alternate gene names: 218690285
Gene position: 2509596-2508835 (Counterclockwise)
Preceding gene: 218690286
Following gene: 218690283
Centisome position: 48.17
GC content: 55.51
Gene sequence:
>762_bases ATGGCACAGGTCGCGATAATTACCGCCTCCGATTCGGGGATCGGCAAAGAGTGCGCGTTATTGCTGGCGCAGCAGGGGTT TGATATTGGCATTACCTGGCACTCAGATGAAGAAGGGGCAAAAGATACCGCGCGTGAGGTAGTTAGCCACGGCGTACGTG CGGAGATCGTGCAACTGGATCTCGGCAATCTACCAGAAGGTGCGCAGGCGCTGGAGAAACTTATTCAACGGCTGGGGCGT ATTGATGTGCTGGTGAATAATGCGGGCGCAATGACCAAAGCGCCGTTTCTTGATATGGCTTTCGATGAGTGGCGCAAGAT TTTTACCGTTGATGTCGATGGTGCATTTTTATGCTCGCAAATTGCTGCCCGCCAGATGGTGAAGCAAGGGCAGGGCGGTC GCATCATCAACATTACATCGGTACATGAACATACGCCGCTGCCGGATGCCAGCGCCTACACAGCCGCTAAACATGCGCTC GGCGGGTTAACCAAAGCAATGGCGCTGGAGTTGGTCAGGCATAAAATTTTGGTGAACGCAGTCGCACCTGGGGCGATCGC CACGCCAATGAACGGCATGGATGGCGGCGACGTGAAGCCCGACGCGGAGCCTTCGATTCCCTTGCGACGTTTTGGCACAA CGCATGAGATTGCCAGCCTGGTGGCCTGGCTATGTTCCGAAGGCGCCAATTACACCACCGGGCAGTCGCTGATTGTCGAT GGCGGTTTTATGCTGGCAAATCCGCAGTTTAAGCCGGAGTAG
Upstream 100 bases:
>100_bases GCCTCCATTCAACTCACTGGTGCGCTGGGCGGGGGGTACAAACGCTGATGATATGCGCCTTCTATACTTAACGTTTGTTG AGCGTTAAGTGGAGAACTCG
Downstream 100 bases:
>100_bases CGCAATGAGGTGAGTGGTTATTTCATTGGGTTAGGCCAGATAAGACACGCCAGCGTCGCATCAGGCATGGTGCACCGGAT GTCGGATGCGGCGCGAACAC
Product: acetoin dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MAQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGAQALEKLIQRLGR IDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHAL GGLTKAMALELVRHKILVNAVAPGAIATPMNGMDGGDVKPDAEPSIPLRRFGTTHEIASLVAWLCSEGANYTTGQSLIVD GGFMLANPQFKPE
Sequences:
>Translated_253_residues MAQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGAQALEKLIQRLGR IDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHAL GGLTKAMALELVRHKILVNAVAPGAIATPMNGMDGGDVKPDAEPSIPLRRFGTTHEIASLVAWLCSEGANYTTGQSLIVD GGFMLANPQFKPE >Mature_252_residues AQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGAQALEKLIQRLGRI DVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALG GLTKAMALELVRHKILVNAVAPGAIATPMNGMDGGDVKPDAEPSIPLRRFGTTHEIASLVAWLCSEGANYTTGQSLIVDG GFMLANPQFKPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=246, Percent_Identity=30.4878048780488, Blast_Score=111, Evalue=8e-25, Organism=Homo sapiens, GI15277342, Length=250, Percent_Identity=32, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI40254992, Length=246, Percent_Identity=32.520325203252, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI7705925, Length=193, Percent_Identity=35.2331606217617, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI19923817, Length=259, Percent_Identity=30.1158301158301, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI10190704, Length=254, Percent_Identity=28.3464566929134, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI126723750, Length=248, Percent_Identity=29.4354838709677, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI5031737, Length=243, Percent_Identity=29.2181069958848, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI7706318, Length=190, Percent_Identity=27.3684210526316, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI20149619, Length=194, Percent_Identity=27.319587628866, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI4503301, Length=235, Percent_Identity=24.2553191489362, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI4504505, Length=240, Percent_Identity=27.9166666666667, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI66933014, Length=250, Percent_Identity=28, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI59889578, Length=181, Percent_Identity=30.939226519337, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI210032110, Length=169, Percent_Identity=27.2189349112426, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI31542939, Length=193, Percent_Identity=26.4248704663212, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI33667109, Length=188, Percent_Identity=30.3191489361702, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI225579078, Length=209, Percent_Identity=30.622009569378, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI4503817, Length=189, Percent_Identity=25.3968253968254, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI40254986, Length=200, Percent_Identity=31, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI109715829, Length=193, Percent_Identity=26.4248704663212, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1788459, Length=253, Percent_Identity=97.6284584980237, Blast_Score=506, Evalue=1e-145, Organism=Escherichia coli, GI1789208, Length=245, Percent_Identity=33.8775510204082, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI87082160, Length=247, Percent_Identity=33.6032388663968, Blast_Score=127, Evalue=6e-31, Organism=Escherichia coli, GI2367175, Length=244, Percent_Identity=30.327868852459, Blast_Score=121, Evalue=5e-29, Organism=Escherichia coli, GI1787335, Length=243, Percent_Identity=32.9218106995885, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=31.7460317460317, Blast_Score=114, Evalue=4e-27, Organism=Escherichia coli, GI1790717, Length=243, Percent_Identity=32.5102880658436, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1787905, Length=241, Percent_Identity=32.7800829875519, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=28.8617886178862, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI2367365, Length=242, Percent_Identity=28.099173553719, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1786812, Length=199, Percent_Identity=32.6633165829146, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI1789057, Length=264, Percent_Identity=27.6515151515151, Blast_Score=84, Evalue=6e-18, Organism=Caenorhabditis elegans, GI71994600, Length=256, Percent_Identity=31.25, Blast_Score=121, Evalue=4e-28, Organism=Caenorhabditis elegans, GI71994604, Length=258, Percent_Identity=29.4573643410853, Blast_Score=120, Evalue=7e-28, Organism=Caenorhabditis elegans, GI17562910, Length=263, Percent_Identity=33.8403041825095, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI115534694, Length=241, Percent_Identity=34.0248962655602, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17555706, Length=243, Percent_Identity=33.7448559670782, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI193204405, Length=264, Percent_Identity=30.6818181818182, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17562990, Length=256, Percent_Identity=30.078125, Blast_Score=107, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17560150, Length=259, Percent_Identity=28.957528957529, Blast_Score=107, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17560676, Length=248, Percent_Identity=29.0322580645161, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17561402, Length=256, Percent_Identity=31.640625, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17562906, Length=261, Percent_Identity=28.735632183908, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17551412, Length=267, Percent_Identity=29.9625468164794, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI25147288, Length=244, Percent_Identity=29.5081967213115, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=29.7709923664122, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17562908, Length=262, Percent_Identity=28.6259541984733, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17563726, Length=258, Percent_Identity=29.4573643410853, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17562904, Length=264, Percent_Identity=29.1666666666667, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17538480, Length=266, Percent_Identity=29.3233082706767, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17531453, Length=262, Percent_Identity=26.7175572519084, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=27.4809160305344, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17560220, Length=268, Percent_Identity=29.1044776119403, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17568967, Length=213, Percent_Identity=32.3943661971831, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI72000259, Length=261, Percent_Identity=29.5019157088123, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17565030, Length=268, Percent_Identity=27.9850746268657, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17538486, Length=262, Percent_Identity=27.4809160305344, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17561272, Length=209, Percent_Identity=25.8373205741627, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17536651, Length=248, Percent_Identity=25.4032258064516, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193203117, Length=190, Percent_Identity=27.3684210526316, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17508651, Length=250, Percent_Identity=26.8, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI193203115, Length=190, Percent_Identity=27.3684210526316, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71997099, Length=203, Percent_Identity=30.0492610837438, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17538182, Length=256, Percent_Identity=28.90625, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17564282, Length=188, Percent_Identity=27.6595744680851, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17536025, Length=249, Percent_Identity=25.3012048192771, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17555612, Length=205, Percent_Identity=29.2682926829268, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17544670, Length=263, Percent_Identity=25.4752851711027, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI32563809, Length=209, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17507613, Length=209, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=245, Percent_Identity=26.1224489795918, Blast_Score=92, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6323882, Length=249, Percent_Identity=25.3012048192771, Blast_Score=69, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6322861, Length=190, Percent_Identity=31.0526315789474, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI28571526, Length=247, Percent_Identity=33.1983805668016, Blast_Score=110, Evalue=7e-25, Organism=Drosophila melanogaster, GI23397609, Length=253, Percent_Identity=30.4347826086957, Blast_Score=107, Evalue=7e-24, Organism=Drosophila melanogaster, GI21355319, Length=250, Percent_Identity=32.4, Blast_Score=107, Evalue=8e-24, Organism=Drosophila melanogaster, GI21357041, Length=247, Percent_Identity=30.7692307692308, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24644339, Length=246, Percent_Identity=28.8617886178862, Blast_Score=100, Evalue=9e-22, Organism=Drosophila melanogaster, GI24639444, Length=246, Percent_Identity=29.2682926829268, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI18859837, Length=233, Percent_Identity=32.1888412017167, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24643142, Length=247, Percent_Identity=28.3400809716599, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24580925, Length=208, Percent_Identity=31.7307692307692, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI28574402, Length=210, Percent_Identity=30.4761904761905, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24584744, Length=210, Percent_Identity=30.4761904761905, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24641232, Length=198, Percent_Identity=30.3030303030303, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24644337, Length=221, Percent_Identity=29.4117647058824, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI161076933, Length=204, Percent_Identity=28.921568627451, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI24584748, Length=204, Percent_Identity=28.921568627451, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI116007236, Length=202, Percent_Identity=26.2376237623762, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI24584752, Length=207, Percent_Identity=29.4685990338164, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI21358495, Length=199, Percent_Identity=26.6331658291457, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI17737361, Length=254, Percent_Identity=25.9842519685039, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI28571387, Length=199, Percent_Identity=29.1457286432161, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI17647419, Length=190, Percent_Identity=25.7894736842105, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24649181, Length=190, Percent_Identity=28.4210526315789, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI116007238, Length=226, Percent_Identity=24.7787610619469, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 26894; Mature: 26763
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLD CCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEE LGNLPEGAQALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQ CCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHCCEEEEEECCHHHHHHH IAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALELVRHKILVNA HHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAPGAIATPMNGMDGGDVKPDAEPSIPLRRFGTTHEIASLVAWLCSEGANYTTGQSLIVD CCCCCEECCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEE GGFMLANPQFKPE CCEEEECCCCCCC >Mature Secondary Structure AQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLD CEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEE LGNLPEGAQALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQ CCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHCCEEEEEECCHHHHHHH IAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALELVRHKILVNA HHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAPGAIATPMNGMDGGDVKPDAEPSIPLRRFGTTHEIASLVAWLCSEGANYTTGQSLIVD CCCCCEECCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEE GGFMLANPQFKPE CCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]