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The map label for this gene is ninB [H]

Identifier: 218690247

GI number: 218690247

Start: 2482780

End: 2483328

Strand: Reverse

Name: ninB [H]

Synonym: ECED1_2542

Alternate gene names: 218690247

Gene position: 2483328-2482780 (Counterclockwise)

Preceding gene: 218690248

Following gene: 218690246

Centisome position: 47.67

GC content: 53.19

Gene sequence:

>549_bases
TTGATGTGTGGGGCTATGCAGAATGTGACCTCTGTGAAGCCAGGGGGGCATGGGCACCATCAGTTGCTGCGGCGGCTGAA
AAATGGAACCGGAGAGCAGGAGATGAAGCAAACCTTTCTGCTTCGCAACGAAGCAATCAGAAATAACGCCATAGACGCCA
TTCTCTCACTACCCATCGACGACAAGTCACCCCACGAAGTCCACGTTAAAGAACCCAAGCGCAGCAAAGCGCAGAATGAC
CGTATGTGGCCGATGCTGAACGATGTTTCGCGTCAGGTGCTATGGCATGGTCAACGGCTGGCGCCGGAAGACTGGAAAGA
CCTGTTCACTGCCCTGTGGCTTAAGACCAAAAAACTGGAGCAACGAAGTGTGCCTGGTATCGACGGTGGCGTTGTCATGC
TTGGTGTGCGTACCAGCAAAATGCGAAAGGCCAACATGACTGAGCTTATCGAAATCATGTTCTGGTTCGGCTCAGAGCGC
AACGTGCGGTGGAGTGATGACTCCTGGCGAGAGTATGAATGGTCACAACGAAAAGGGAAGGCTGCATGA

Upstream 100 bases:

>100_bases
GGAGTGAGCATGAGCGACCTATCATTAACCCAGCCAAAGCTAAAAGAATGTCCGTTTTGCGGCGGTAATGCTCGTCTGTG
GGTTGAGGCCGGAATAAATA

Downstream 100 bases:

>100_bases
CTATCAAATCAAATACGCCAGCACACGACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTGATGCACTGGATATTGAG
TTTGGATTCTGGCTGGATTC

Product: putative prophage protein ninB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MMCGAMQNVTSVKPGGHGHHQLLRRLKNGTGEQEMKQTFLLRNEAIRNNAIDAILSLPIDDKSPHEVHVKEPKRSKAQND
RMWPMLNDVSRQVLWHGQRLAPEDWKDLFTALWLKTKKLEQRSVPGIDGGVVMLGVRTSKMRKANMTELIEIMFWFGSER
NVRWSDDSWREYEWSQRKGKAA

Sequences:

>Translated_182_residues
MMCGAMQNVTSVKPGGHGHHQLLRRLKNGTGEQEMKQTFLLRNEAIRNNAIDAILSLPIDDKSPHEVHVKEPKRSKAQND
RMWPMLNDVSRQVLWHGQRLAPEDWKDLFTALWLKTKKLEQRSVPGIDGGVVMLGVRTSKMRKANMTELIEIMFWFGSER
NVRWSDDSWREYEWSQRKGKAA
>Mature_182_residues
MMCGAMQNVTSVKPGGHGHHQLLRRLKNGTGEQEMKQTFLLRNEAIRNNAIDAILSLPIDDKSPHEVHVKEPKRSKAQND
RMWPMLNDVSRQVLWHGQRLAPEDWKDLFTALWLKTKKLEQRSVPGIDGGVVMLGVRTSKMRKANMTELIEIMFWFGSER
NVRWSDDSWREYEWSQRKGKAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ninB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008711 [H]

Pfam domain/function: PF05772 NinB [H]

EC number: NA

Molecular weight: Translated: 21135; Mature: 21135

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMCGAMQNVTSVKPGGHGHHQLLRRLKNGTGEQEMKQTFLLRNEAIRNNAIDAILSLPID
CCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DKSPHEVHVKEPKRSKAQNDRMWPMLNDVSRQVLWHGQRLAPEDWKDLFTALWLKTKKLE
CCCCCEEECCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
QRSVPGIDGGVVMLGVRTSKMRKANMTELIEIMFWFGSERNVRWSDDSWREYEWSQRKGK
HHCCCCCCCCEEEEECCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC
AA
CC
>Mature Secondary Structure
MMCGAMQNVTSVKPGGHGHHQLLRRLKNGTGEQEMKQTFLLRNEAIRNNAIDAILSLPID
CCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DKSPHEVHVKEPKRSKAQNDRMWPMLNDVSRQVLWHGQRLAPEDWKDLFTALWLKTKKLE
CCCCCEEECCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
QRSVPGIDGGVVMLGVRTSKMRKANMTELIEIMFWFGSERNVRWSDDSWREYEWSQRKGK
HHCCCCCCCCEEEEECCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC
AA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]