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The map label for this gene is ydfR [C]

Identifier: 218690234

GI number: 218690234

Start: 2473872

End: 2474402

Strand: Reverse

Name: ydfR [C]

Synonym: ECED1_2529

Alternate gene names: 218690234

Gene position: 2474402-2473872 (Counterclockwise)

Preceding gene: 218690235

Following gene: 218690232

Centisome position: 47.5

GC content: 44.82

Gene sequence:

>531_bases
ATGAATAAACAATACAAACTGGTTGTTAAAGGGATAAATAATTACCCGGATAAGATTACTGCTACTGTGGCACTGGAAAT
TGGTGGGTATCCGTCACTGTTGTTGCCATATGTGGCGATTAGTCTTGACCGTACTGAAGGTGCCACGCTGGAGTTTTACG
AAGCTGAGGCGAAAAAACAGGCGAAGCAGTTTTTCATGGATATTGCTGCCGCTTTATGTGAAGGGGATGAGCAGTCGCCG
GAAAAGCGCCCCATAATTTTAGAGGCGCAGGATGTGTTGATAACCTACAGAGGAAAACTACCGGGAATAATTACTGGTTC
TCTGAAGACGCCACCGACGGCATTGCGGTCAGAAAACGATGATATTGAATCACGCATTGAAAAACTGGAGTGCTATATCG
CTGAATTGAAAAAAAGCACCCCAACAAAAAATGAGGTGCTTGCAGCAGATGAAATGAAAGAAACTATTCTTGATCGCGCG
GCGCATCTAAGCTGCGCTTCACTGTTGAAAGAGCATCTTCAGCAGCCTTGA

Upstream 100 bases:

>100_bases
GTGCTGGGGAGTCTGCTGTTTGGGCTGCTGACATATCTGACTAACCTGTATTTCAAAATCAGAGAGGACCGTCGTAAGGC
AGCGCGGGGAGAGTAAGGCG

Downstream 100 bases:

>100_bases
GGAATCTTTTATCATCACGAGCAACTGTCTTTGGTATTTCTTTAATTAGATGTTCCATTTCGGCGATCAGGTAATCTGAC
ACAGCGTTATTTTTACTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MNKQYKLVVKGINNYPDKITATVALEIGGYPSLLLPYVAISLDRTEGATLEFYEAEAKKQAKQFFMDIAAALCEGDEQSP
EKRPIILEAQDVLITYRGKLPGIITGSLKTPPTALRSENDDIESRIEKLECYIAELKKSTPTKNEVLAADEMKETILDRA
AHLSCASLLKEHLQQP

Sequences:

>Translated_176_residues
MNKQYKLVVKGINNYPDKITATVALEIGGYPSLLLPYVAISLDRTEGATLEFYEAEAKKQAKQFFMDIAAALCEGDEQSP
EKRPIILEAQDVLITYRGKLPGIITGSLKTPPTALRSENDDIESRIEKLECYIAELKKSTPTKNEVLAADEMKETILDRA
AHLSCASLLKEHLQQP
>Mature_176_residues
MNKQYKLVVKGINNYPDKITATVALEIGGYPSLLLPYVAISLDRTEGATLEFYEAEAKKQAKQFFMDIAAALCEGDEQSP
EKRPIILEAQDVLITYRGKLPGIITGSLKTPPTALRSENDDIESRIEKLECYIAELKKSTPTKNEVLAADEMKETILDRA
AHLSCASLLKEHLQQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787837, Length=74, Percent_Identity=41.8918918918919, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19553; Mature: 19553

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKQYKLVVKGINNYPDKITATVALEIGGYPSLLLPYVAISLDRTEGATLEFYEAEAKKQ
CCCCEEEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHH
AKQFFMDIAAALCEGDEQSPEKRPIILEAQDVLITYRGKLPGIITGSLKTPPTALRSEND
HHHHHHHHHHHHHCCCCCCCCCCCEEEEECEEEEEECCCCCCEEECCCCCCCHHHCCCCC
DIESRIEKLECYIAELKKSTPTKNEVLAADEMKETILDRAAHLSCASLLKEHLQQP
CHHHHHHHHHHHHHHHHHCCCCCHHEECHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKQYKLVVKGINNYPDKITATVALEIGGYPSLLLPYVAISLDRTEGATLEFYEAEAKKQ
CCCCEEEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHH
AKQFFMDIAAALCEGDEQSPEKRPIILEAQDVLITYRGKLPGIITGSLKTPPTALRSEND
HHHHHHHHHHHHHCCCCCCCCCCCEEEEECEEEEEECCCCCCEEECCCCCCCHHHCCCCC
DIESRIEKLECYIAELKKSTPTKNEVLAADEMKETILDRAAHLSCASLLKEHLQQP
CHHHHHHHHHHHHHHHHHCCCCCHHEECHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA