Click here to switch to the map view.

The map label for this gene is rz [H]

Identifier: 218690229

GI number: 218690229

Start: 2471224

End: 2471775

Strand: Reverse

Name: rz [H]

Synonym: ECED1_2522

Alternate gene names: 218690229

Gene position: 2471775-2471224 (Counterclockwise)

Preceding gene: 218690230

Following gene: 218690228

Centisome position: 47.45

GC content: 54.17

Gene sequence:

>552_bases
GTGCTGAACTTATTCGGGCAATGGCATTTGCCATTCGTATTGTGGCCATTGCTGTTCTGGTCTGGGCAATCCGTTGGTGG
TGATATGAACCGTGTTCTGTGTGTGGTGATTATTGTCCTGCTGGTAGCCTGTGGTGTGCTTAGTCTGGGGCTGAATCATT
ACCGCGATAACGCCATCACCTACAAAGCGCAGCGCGATAAAAAAGTCAGAGAGCTGGAGCTGGCAAACGCAACCATTACT
GATATGCAGGTGCGCCAGCGTGATGTTGCTGCGCTCGATGCAAAATACTCGAGGGAATTAGCTGATGCGAGAGCTGAAAA
TGAAACTCTTCGCGCTGACGTTGCCGCTGGTCGCCGCAGCCTGCGTATCAACGCCACCTGTCCAGGTCCCGTGCGTGAAG
CCACCGGCACCGCCCGCGTGGATAATGCAACCGGCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCACCCTCAGA
GAGCGGCTGATGACGATGCAGAAGCAACTGGAAGGGGCACAGGAATATATCCGTACTCAGTGCCTGAATTAA

Upstream 100 bases:

>100_bases
TGCTATTAAGTGGGTGGCTGTTGGTATTGCTGTGTCTCCGATGCTGTATGGGCTGGCAAAACTGGTCATTGCGCTGAAAT
CGTGAACTTTAAAAAGATGA

Downstream 100 bases:

>100_bases
CAGAGCCAGCATGAATGCTGTCAATCTTCTGCGGAGGTAAAGATTGCATTATGCGACAATTTGTTGCATGATTTAGGTGC
GCTTTTCCATAGCGTATGCG

Product: Endopeptidase (Lysis protein) from bacteriophage origin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MLNLFGQWHLPFVLWPLLFWSGQSVGGDMNRVLCVVIIVLLVACGVLSLGLNHYRDNAITYKAQRDKKVRELELANATIT
DMQVRQRDVAALDAKYSRELADARAENETLRADVAAGRRSLRINATCPGPVREATGTARVDNATGPRLADTAERDYFTLR
ERLMTMQKQLEGAQEYIRTQCLN

Sequences:

>Translated_183_residues
MLNLFGQWHLPFVLWPLLFWSGQSVGGDMNRVLCVVIIVLLVACGVLSLGLNHYRDNAITYKAQRDKKVRELELANATIT
DMQVRQRDVAALDAKYSRELADARAENETLRADVAAGRRSLRINATCPGPVREATGTARVDNATGPRLADTAERDYFTLR
ERLMTMQKQLEGAQEYIRTQCLN
>Mature_183_residues
MLNLFGQWHLPFVLWPLLFWSGQSVGGDMNRVLCVVIIVLLVACGVLSLGLNHYRDNAITYKAQRDKKVRELELANATIT
DMQVRQRDVAALDAKYSRELADARAENETLRADVAAGRRSLRINATCPGPVREATGTARVDNATGPRLADTAERDYFTLR
ERLMTMQKQLEGAQEYIRTQCLN

Specific function: Necessary for host cell lysis. It is believed to code for an endopeptidase that cleaves the amino-carboxyl cross-link between the diaminopimelic acid and D-alanine residues in the murein component of the bacterial cell wall [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786769, Length=153, Percent_Identity=67.9738562091503, Blast_Score=202, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004929 [H]

Pfam domain/function: PF03245 Phage_lysis [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 20594; Mature: 20594

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLFGQWHLPFVLWPLLFWSGQSVGGDMNRVLCVVIIVLLVACGVLSLGLNHYRDNAIT
CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
YKAQRDKKVRELELANATITDMQVRQRDVAALDAKYSRELADARAENETLRADVAAGRRS
EEHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCE
LRINATCPGPVREATGTARVDNATGPRLADTAERDYFTLRERLMTMQKQLEGAQEYIRTQ
EEEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLN
CCC
>Mature Secondary Structure
MLNLFGQWHLPFVLWPLLFWSGQSVGGDMNRVLCVVIIVLLVACGVLSLGLNHYRDNAIT
CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
YKAQRDKKVRELELANATITDMQVRQRDVAALDAKYSRELADARAENETLRADVAAGRRS
EEHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCE
LRINATCPGPVREATGTARVDNATGPRLADTAERDYFTLRERLMTMQKQLEGAQEYIRTQ
EEEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLN
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]