| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218690210
Identifier: 218690210
GI number: 218690210
Start: 2458541
End: 2459257
Strand: Reverse
Name: 218690210
Synonym: ECED1_2503
Alternate gene names: NA
Gene position: 2459257-2458541 (Counterclockwise)
Preceding gene: 218690211
Following gene: 218690209
Centisome position: 47.21
GC content: 54.81
Gene sequence:
>717_bases ATGTCTGCTTTGTATGAACGCTCACAGCTGACGCAGGTGATGATTTCATCTGCCCCGGCGACTGCTGAAACTATGGATAA GGCGGAATATCTGCGCCTGGACTGCACCATCAAGGAAGTCCAGTTCACCGCCGGTCAGAAACAGGATATTGATGTGACCA CGCTCTGCTCCACAGAGCAGGAGAACATCAACGGTCTGGGGGCGTCGTCCGAGATTTCCATGTCGGGTAATTTTTATCTG AATCAGGCCCAGAACGCCCTGCGTGATGCCTATGACAATGACACGGTGTATGCGTTTAAGGTGCAGTTTCCGTCCGGTAA GGGCTTTAAGTTCCTGGCGGAAGTGCGTCAGCACACCTGGTCATCCGGTACCAACGGCGTGGTGGCTGCAACGTTTTCAC TGCGCCTGAAAGGCAAACCGATGTTCTATGTGGTACCGCTGGCGTTTGTGAAAAATCTGGAGAAGACACTTGCCGTGAAT ACTGGTGCGCTGCTGACAATGTCAGTCAGTGTCAACGGGGGAACGCCGCCGTATAAATACGCCTGGAAGAAGGACGGTCA GCCGGTTGAGGGGCAGACGGCTGACACCTTCAGTAAGCCAAACGCGCAGTCCGCCGATGCGGGGAAATATACCTGCGTGG TGACCGATTCGGCAGAGAGGGCACAGAGTGTGACGTCTGTTGAATGCACCGTGACTGTGAGCGCAGCCGCCGGATAA
Upstream 100 bases:
>100_bases CCGTGCAACCCTGGAGTTTCAGGTCACGGTGTGACTTTTTCTTTTTTTCTACAAAACCCATACCCCGCCGCGTGCGGGTT TTTTATTATCAGGAGGCAGA
Downstream 100 bases:
>100_bases GGGGATGGGTCATCATGAAAAAGGATCTGAAAACGCTGGCGCTGGCCAGACTGTCAGGGTTTCGTCATAAAACGGTGCGG GTGCCTGAATGGGAAAATGT
Product: putative major tail subunit in prophage
Products: NA
Alternate protein names: Tail Subunit
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MSALYERSQLTQVMISSAPATAETMDKAEYLRLDCTIKEVQFTAGQKQDIDVTTLCSTEQENINGLGASSEISMSGNFYL NQAQNALRDAYDNDTVYAFKVQFPSGKGFKFLAEVRQHTWSSGTNGVVAATFSLRLKGKPMFYVVPLAFVKNLEKTLAVN TGALLTMSVSVNGGTPPYKYAWKKDGQPVEGQTADTFSKPNAQSADAGKYTCVVTDSAERAQSVTSVECTVTVSAAAG
Sequences:
>Translated_238_residues MSALYERSQLTQVMISSAPATAETMDKAEYLRLDCTIKEVQFTAGQKQDIDVTTLCSTEQENINGLGASSEISMSGNFYL NQAQNALRDAYDNDTVYAFKVQFPSGKGFKFLAEVRQHTWSSGTNGVVAATFSLRLKGKPMFYVVPLAFVKNLEKTLAVN TGALLTMSVSVNGGTPPYKYAWKKDGQPVEGQTADTFSKPNAQSADAGKYTCVVTDSAERAQSVTSVECTVTVSAAAG >Mature_237_residues SALYERSQLTQVMISSAPATAETMDKAEYLRLDCTIKEVQFTAGQKQDIDVTTLCSTEQENINGLGASSEISMSGNFYLN QAQNALRDAYDNDTVYAFKVQFPSGKGFKFLAEVRQHTWSSGTNGVVAATFSLRLKGKPMFYVVPLAFVKNLEKTLAVNT GALLTMSVSVNGGTPPYKYAWKKDGQPVEGQTADTFSKPNAQSADAGKYTCVVTDSAERAQSVTSVECTVTVSAAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25613; Mature: 25482
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS50835 IG_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALYERSQLTQVMISSAPATAETMDKAEYLRLDCTIKEVQFTAGQKQDIDVTTLCSTEQ CCCHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEEEEECCCCCCCCEEEEEECCCC ENINGLGASSEISMSGNFYLNQAQNALRDAYDNDTVYAFKVQFPSGKGFKFLAEVRQHTW CCCCCCCCCCEEEECCCEEEHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHC SSGTNGVVAATFSLRLKGKPMFYVVPLAFVKNLEKTLAVNTGALLTMSVSVNGGTPPYKY CCCCCCEEEEEEEEEECCCCEEEEEHHHHHHHHHHHEEECCCEEEEEEEEECCCCCCCCE AWKKDGQPVEGQTADTFSKPNAQSADAGKYTCVVTDSAERAQSVTSVECTVTVSAAAG EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCEEEEEEEEEEECCC >Mature Secondary Structure SALYERSQLTQVMISSAPATAETMDKAEYLRLDCTIKEVQFTAGQKQDIDVTTLCSTEQ CCHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEEEEECCCCCCCCEEEEEECCCC ENINGLGASSEISMSGNFYLNQAQNALRDAYDNDTVYAFKVQFPSGKGFKFLAEVRQHTW CCCCCCCCCCEEEECCCEEEHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHC SSGTNGVVAATFSLRLKGKPMFYVVPLAFVKNLEKTLAVNTGALLTMSVSVNGGTPPYKY CCCCCCEEEEEEEEEECCCCEEEEEHHHHHHHHHHHEEECCCEEEEEEEEECCCCCCCCE AWKKDGQPVEGQTADTFSKPNAQSADAGKYTCVVTDSAERAQSVTSVECTVTVSAAAG EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA