| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218690142
Identifier: 218690142
GI number: 218690142
Start: 2378161
End: 2379375
Strand: Reverse
Name: 218690142
Synonym: ECED1_2430
Alternate gene names: NA
Gene position: 2379375-2378161 (Counterclockwise)
Preceding gene: 218690144
Following gene: 218690141
Centisome position: 45.67
GC content: 37.78
Gene sequence:
>1215_bases ATGACTGGAAATATTCACCAGAATTATAATGCAAGGGATGTAATTAATGCCCCGGAAGTAAAAACAGCAATTTTGCAAAG AAGTCTGTTTCGCCAGGATAATGAGACCATCCAAAAATGGTTACTCAACCATTTTTATCGATGGCTAATTAGTGACTTTC CAATGGTGCAACAAATTAACTCGCTTGCAGAATATTCACTGTTTAATAAAAATGATGATGTAATCCCGGAATGGCTGGTA TCGAAGTTTAATACTGCCTCAGTATCAACTGCGACACTTTATTATATCGAAACCGATCATCAACAAATATTAACCAAAGA ACGGGAGTTGGTGGAATTTCTTTCCAGGAAATGTGGTACCCGTCTGGAATCAAAACTACAGCGCATAACCTGCTACGTTG CGTTCAGAATGCGTGAAGAAGAGCATGAAAAGATGCTTCAACGACGCGAGAAAGGGTGGCAGCCGAGTGAACAAAATACT GTAAAGTCAATACTTGATGTGCCAGACGGAAAAATTGTTGAGTTTGATGCCAGTCATTCGAACCTTCGTCGTGAAATGGC TTATGAATCATGGCATATGCAACATTGCGTAGGCCAGTTTGATGATCGAAAAAATCTTACCGGTGGTTATGGTGAGTATT ATGCAAATCAAATTGAGCAACATAAATTACGGTTATTCAGTTTGCGTGATAATAATAATATTCCTCATGTTACTATTGCT CTCAATGTTGTTGGTGATTCACTTGAAATTGATCAAATAAAAGGTAAGCAAAATCGTCATCCAGTTAAAAAATATGCGGA CGATGTTTTGTCTCTTTTGCAACTATTATCACCACAAGCAGTTCGACATAGTGATTGTGAAGGTATGGGTATTGTTTATG AAAATACACCTGAATATCAGGGGTGGAAATATGTAACGGAAGTATACGAAACCAGTTTTTTACTAAGCGTACTACATAAT AACTTTCATTTATTAGAACATTTTACAAATCCTTCAGTGGAGTTGCAGTGGTTACTGTTACACAGCGCACCTGATAAGTT ACATTATCTTAATGCTATTGACCCTATAGTTGCTACTTCTGCGGAAATGTTATTCCCTGGCGCTGAGTGGCATCCGCAAT TTGCAGGTCAAAATATCAGCAACATTTCCTTTGAGATAGAGAGTTTGACATTACAGACATCTCATTACTTACCCCTGTCA GAGGTTGAAAAATAA
Upstream 100 bases:
>100_bases GGCTTACTTGAGTATGTACCTGCAACCATGCTGATTTAGATAAAAAATCTATAGTCAACAATTATTGCTTTGAGTGATAT AATAAACACGGGCGGATGTT
Downstream 100 bases:
>100_bases TGAGTCTTATCATTGTTCTCCTGGTCGCAATATTTATTTTTATCTATAGATACAAAAAAAACAAACCACAAATCGATGCT TTTATTGCTAAAGAAAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MTGNIHQNYNARDVINAPEVKTAILQRSLFRQDNETIQKWLLNHFYRWLISDFPMVQQINSLAEYSLFNKNDDVIPEWLV SKFNTASVSTATLYYIETDHQQILTKERELVEFLSRKCGTRLESKLQRITCYVAFRMREEEHEKMLQRREKGWQPSEQNT VKSILDVPDGKIVEFDASHSNLRREMAYESWHMQHCVGQFDDRKNLTGGYGEYYANQIEQHKLRLFSLRDNNNIPHVTIA LNVVGDSLEIDQIKGKQNRHPVKKYADDVLSLLQLLSPQAVRHSDCEGMGIVYENTPEYQGWKYVTEVYETSFLLSVLHN NFHLLEHFTNPSVELQWLLLHSAPDKLHYLNAIDPIVATSAEMLFPGAEWHPQFAGQNISNISFEIESLTLQTSHYLPLS EVEK
Sequences:
>Translated_404_residues MTGNIHQNYNARDVINAPEVKTAILQRSLFRQDNETIQKWLLNHFYRWLISDFPMVQQINSLAEYSLFNKNDDVIPEWLV SKFNTASVSTATLYYIETDHQQILTKERELVEFLSRKCGTRLESKLQRITCYVAFRMREEEHEKMLQRREKGWQPSEQNT VKSILDVPDGKIVEFDASHSNLRREMAYESWHMQHCVGQFDDRKNLTGGYGEYYANQIEQHKLRLFSLRDNNNIPHVTIA LNVVGDSLEIDQIKGKQNRHPVKKYADDVLSLLQLLSPQAVRHSDCEGMGIVYENTPEYQGWKYVTEVYETSFLLSVLHN NFHLLEHFTNPSVELQWLLLHSAPDKLHYLNAIDPIVATSAEMLFPGAEWHPQFAGQNISNISFEIESLTLQTSHYLPLS EVEK >Mature_403_residues TGNIHQNYNARDVINAPEVKTAILQRSLFRQDNETIQKWLLNHFYRWLISDFPMVQQINSLAEYSLFNKNDDVIPEWLVS KFNTASVSTATLYYIETDHQQILTKERELVEFLSRKCGTRLESKLQRITCYVAFRMREEEHEKMLQRREKGWQPSEQNTV KSILDVPDGKIVEFDASHSNLRREMAYESWHMQHCVGQFDDRKNLTGGYGEYYANQIEQHKLRLFSLRDNNNIPHVTIAL NVVGDSLEIDQIKGKQNRHPVKKYADDVLSLLQLLSPQAVRHSDCEGMGIVYENTPEYQGWKYVTEVYETSFLLSVLHNN FHLLEHFTNPSVELQWLLLHSAPDKLHYLNAIDPIVATSAEMLFPGAEWHPQFAGQNISNISFEIESLTLQTSHYLPLSE VEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47116; Mature: 46985
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGNIHQNYNARDVINAPEVKTAILQRSLFRQDNETIQKWLLNHFYRWLISDFPMVQQIN CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHH SLAEYSLFNKNDDVIPEWLVSKFNTASVSTATLYYIETDHQQILTKERELVEFLSRKCGT HHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCH RLESKLQRITCYVAFRMREEEHEKMLQRREKGWQPSEQNTVKSILDVPDGKIVEFDASHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCCHH NLRREMAYESWHMQHCVGQFDDRKNLTGGYGEYYANQIEQHKLRLFSLRDNNNIPHVTIA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCEEEEE LNVVGDSLEIDQIKGKQNRHPVKKYADDVLSLLQLLSPQAVRHSDCEGMGIVYENTPEYQ EEEECCCEEHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEECCCCCCC GWKYVTEVYETSFLLSVLHNNFHLLEHFTNPSVELQWLLLHSAPDKLHYLNAIDPIVATS CHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCC AEMLFPGAEWHPQFAGQNISNISFEIESLTLQTSHYLPLSEVEK HHHHCCCCCCCHHHCCCCCCCCEEEEEEEEEECCCCCCHHHHCC >Mature Secondary Structure TGNIHQNYNARDVINAPEVKTAILQRSLFRQDNETIQKWLLNHFYRWLISDFPMVQQIN CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHH SLAEYSLFNKNDDVIPEWLVSKFNTASVSTATLYYIETDHQQILTKERELVEFLSRKCGT HHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCH RLESKLQRITCYVAFRMREEEHEKMLQRREKGWQPSEQNTVKSILDVPDGKIVEFDASHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCCHH NLRREMAYESWHMQHCVGQFDDRKNLTGGYGEYYANQIEQHKLRLFSLRDNNNIPHVTIA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCEEEEE LNVVGDSLEIDQIKGKQNRHPVKKYADDVLSLLQLLSPQAVRHSDCEGMGIVYENTPEYQ EEEECCCEEHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEECCCCCCC GWKYVTEVYETSFLLSVLHNNFHLLEHFTNPSVELQWLLLHSAPDKLHYLNAIDPIVATS CHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCC AEMLFPGAEWHPQFAGQNISNISFEIESLTLQTSHYLPLSEVEK HHHHCCCCCCCHHHCCCCCCCCEEEEEEEEEECCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA