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The map label for this gene is alpA [C]

Identifier: 218690044

GI number: 218690044

Start: 2265335

End: 2265553

Strand: Reverse

Name: alpA [C]

Synonym: ECED1_2322

Alternate gene names: 218690044

Gene position: 2265553-2265335 (Counterclockwise)

Preceding gene: 218690045

Following gene: 218690043

Centisome position: 43.49

GC content: 35.16

Gene sequence:

>219_bases
ATGGTTCAAAACAAAACAGATAAAACTTTAAAACTTATTCGCTTATCAGAAGTAATAAGGAAAACCGGGTTCGGCAAAAC
GTGGATTTATAAACTTATCAGCGCGGGGAAATTCCCCAAACAAATAAAAATCGGTGACAGAGCTGTTGCTTTCATTGAAA
GCGAAGTTGATGAGTGGATTTATAAAGCTATAACTGCTTCTCGTAATACATCTAACTAA

Upstream 100 bases:

>100_bases
CTCCAAAAATTTCCGCGAAACTCACGGTTGGTGAACATCCCTAGTTTAGAACCAGCTAAAATCCTAGAATTATCTCCATC
GAACAACACAGGAGATAAAC

Downstream 100 bases:

>100_bases
TAAAAGGAAAATAACATGAAAAATATAAATGTGTCTGAAATATCATTTATCTTTGATAATGATAAAACTGAAGTTTTCTC
AAGAATGGCAATGGATAACT

Product: putative DNA binding protein from phage origin

Products: NA

Alternate protein names: Phage-Related Protein; Regulatory Protein; Phage Transcriptional Regulator; Transcriptional Regulator AlpA Family; Prophage Regulatory Protein; Prophage CP4-57 Regulatory Protein; CP4-57 Prophage; Prophage Transcriptional Regulator; Regulatory Protein Prophage

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MVQNKTDKTLKLIRLSEVIRKTGFGKTWIYKLISAGKFPKQIKIGDRAVAFIESEVDEWIYKAITASRNTSN

Sequences:

>Translated_72_residues
MVQNKTDKTLKLIRLSEVIRKTGFGKTWIYKLISAGKFPKQIKIGDRAVAFIESEVDEWIYKAITASRNTSN
>Mature_72_residues
MVQNKTDKTLKLIRLSEVIRKTGFGKTWIYKLISAGKFPKQIKIGDRAVAFIESEVDEWIYKAITASRNTSN

Specific function: Positive Regulator Of The Expression Of The Slpa Gene. [C]

COG id: COG3311

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8247; Mature: 8247

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQNKTDKTLKLIRLSEVIRKTGFGKTWIYKLISAGKFPKQIKIGDRAVAFIESEVDEWI
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHH
YKAITASRNTSN
HHHHHHCCCCCC
>Mature Secondary Structure
MVQNKTDKTLKLIRLSEVIRKTGFGKTWIYKLISAGKFPKQIKIGDRAVAFIESEVDEWI
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHH
YKAITASRNTSN
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA