| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is irp [H]
Identifier: 218689971
GI number: 218689971
Start: 2165774
End: 2167078
Strand: Reverse
Name: irp [H]
Synonym: ECED1_2244
Alternate gene names: 218689971
Gene position: 2167078-2165774 (Counterclockwise)
Preceding gene: 218689972
Following gene: 218689962
Centisome position: 41.6
GC content: 55.33
Gene sequence:
>1305_bases ATGAAAATCAGTGAATTTTTACACCTGGCGTTACCAGAGGAACAATGGCTGCCGACGATTTCTGGCGTTTTACGCCAGTT CGCAGAAGAAGAGTGTTATGTCTATGAGCGTCAACCCTGTTGGTATTTAGGCAAAGGGTGCCTGGCACGGTTGCACATTA ATGCCGACGGAACGCAGGCGACATTTATTGATGATGCCGGGGAGCAACAATGGGCGGTGGATTCCATTACCGACTGCGCG CGTCGTTTTATGGCACATCCTCAGGTGAAAGGACGTCGGGTTTATGGACAGGTTGGGTTCAACTTTGCGGCGCATGCGCG GGGGATTGCCTTTAACGCCGGGGAGTGGCCGCTGCTGACGTTAACCGTTCCCCGTGAAGAACTTATTTTTGAAAAGGGAA ATGTCACCGTTTATGCGGACTCCGCCGACGGGGGCCGACGTTTGTGTGAGTGGGTAAAAGAGGCCAGTACAACGACGCAG AACGCACCACTGGCGGTGGATACCGCCCTCAATGGCGAGGCGTATAAACAACAGGTTGCACGCGCCGTTGCGGAGATCCG CCGTGGCGAGTATGTCAAAGTGATTGTCTCGCGCGCTATTCCCCTGCCATCGCGGATTGATATGCCCGCCACGCTGTTAT ACGGGCGGCAGGCAAATACACCTGTGCGCTCGTTTATGTTCCGTCAGGAAGGACGCGAAGCGCTGGGCTTTAGCCCGGAA CTGGTGATGTCAGTGACGGGCAATAAAGTGGTCACTGAACCGCTTGCGGGCACCCGCGATCGCATGGGAAACCCGGAGCA TAATAAGGCGAAAGAGGCAGAACTGCTGCACGACAGTAAAGAGGTGCTTGAGCATATCCTTTCTGTCAAAGAAGCGATTG CTGAACTGGAGGCCGTTTGCCTGCCGGGCAGCGTGGTGGTTGAAGATTTAATGTCGGTTCGCCAGCGCGGCAGCGTTCAG CATCTGGGGTCCGGCGTGAGCGGTCAGCTTGCGGAAAACAAGGATGCCTGGGATGCGTTTACCGTGCTGTTTCCGTCGAT TACCGCCTCAGGTATCCCTAAAAACGCTGCCCTGAACGCGATTATGCAAATTGAGAAGACGCCGCGAGAGCTCTATTCCG GCGCAATTCTGCTGCTGGACGATATGCGCTTCGATGCGGCGCTAGTTCTGCGTTCCGTATTTCAGGACAGCCAGCGCTGC TGGATACAAGCGGGGGCGGGAATCATCGCGCAATCTACACCGGAACGCGAACTGACGGAAACCCGGGAGAAATTAGCGAG CATTGCGCCCTATTTAATGGTGTAG
Upstream 100 bases:
>100_bases GTTGCTGGCGGCGTGGGTTGCTTATATCCGGCTGCATTCGGCAAGAGAACTGATGACAAGCGCAATTGATTGATCCGGGA ATAACACAGAGAGGTAAGGG
Downstream 100 bases:
>100_bases GAGTAACTGTTTTCTAACCTCACAACCAGACTGTCCAAAGACAATTGAGTCGCTCTTTGATTCCTCTGTGACTCTATTGT CTTCTTTTTGGATAAAATAG
Product: salicylate synthase Irp9
Products: NA
Alternate protein names: Mycobactin synthase protein I; Salicylate synthase mbtI [H]
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MKISEFLHLALPEEQWLPTISGVLRQFAEEECYVYERQPCWYLGKGCLARLHINADGTQATFIDDAGEQQWAVDSITDCA RRFMAHPQVKGRRVYGQVGFNFAAHARGIAFNAGEWPLLTLTVPREELIFEKGNVTVYADSADGGRRLCEWVKEASTTTQ NAPLAVDTALNGEAYKQQVARAVAEIRRGEYVKVIVSRAIPLPSRIDMPATLLYGRQANTPVRSFMFRQEGREALGFSPE LVMSVTGNKVVTEPLAGTRDRMGNPEHNKAKEAELLHDSKEVLEHILSVKEAIAELEAVCLPGSVVVEDLMSVRQRGSVQ HLGSGVSGQLAENKDAWDAFTVLFPSITASGIPKNAALNAIMQIEKTPRELYSGAILLLDDMRFDAALVLRSVFQDSQRC WIQAGAGIIAQSTPERELTETREKLASIAPYLMV
Sequences:
>Translated_434_residues MKISEFLHLALPEEQWLPTISGVLRQFAEEECYVYERQPCWYLGKGCLARLHINADGTQATFIDDAGEQQWAVDSITDCA RRFMAHPQVKGRRVYGQVGFNFAAHARGIAFNAGEWPLLTLTVPREELIFEKGNVTVYADSADGGRRLCEWVKEASTTTQ NAPLAVDTALNGEAYKQQVARAVAEIRRGEYVKVIVSRAIPLPSRIDMPATLLYGRQANTPVRSFMFRQEGREALGFSPE LVMSVTGNKVVTEPLAGTRDRMGNPEHNKAKEAELLHDSKEVLEHILSVKEAIAELEAVCLPGSVVVEDLMSVRQRGSVQ HLGSGVSGQLAENKDAWDAFTVLFPSITASGIPKNAALNAIMQIEKTPRELYSGAILLLDDMRFDAALVLRSVFQDSQRC WIQAGAGIIAQSTPERELTETREKLASIAPYLMV >Mature_434_residues MKISEFLHLALPEEQWLPTISGVLRQFAEEECYVYERQPCWYLGKGCLARLHINADGTQATFIDDAGEQQWAVDSITDCA RRFMAHPQVKGRRVYGQVGFNFAAHARGIAFNAGEWPLLTLTVPREELIFEKGNVTVYADSADGGRRLCEWVKEASTTTQ NAPLAVDTALNGEAYKQQVARAVAEIRRGEYVKVIVSRAIPLPSRIDMPATLLYGRQANTPVRSFMFRQEGREALGFSPE LVMSVTGNKVVTEPLAGTRDRMGNPEHNKAKEAELLHDSKEVLEHILSVKEAIAELEAVCLPGSVVVEDLMSVRQRGSVQ HLGSGVSGQLAENKDAWDAFTVLFPSITASGIPKNAALNAIMQIEKTPRELYSGAILLLDDMRFDAALVLRSVFQDSQRC WIQAGAGIIAQSTPERELTETREKLASIAPYLMV
Specific function: Mediates the production of salicylate from chorismate via an isochorismate intermediate. Presents both isochorismate synthase and isochorismate-pyruvate lyase activities. Salycilate is the starter unit in the production of the virulence-conferring salicyl
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family. Salicylate synthase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=251, Percent_Identity=33.4661354581673, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1788114, Length=262, Percent_Identity=25.9541984732824, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI87082077, Length=265, Percent_Identity=28.3018867924528, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786809, Length=266, Percent_Identity=27.8195488721804, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6320935, Length=256, Percent_Identity=30.078125, Blast_Score=117, Evalue=5e-27,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR015890 - InterPro: IPR019996 [H]
Pfam domain/function: PF00425 Chorismate_bind [H]
EC number: =5.4.4.2 [H]
Molecular weight: Translated: 48002; Mature: 48002
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISEFLHLALPEEQWLPTISGVLRQFAEEECYVYERQPCWYLGKGCLARLHINADGTQA CCHHHHHHHCCCCHHCCHHHHHHHHHHCCCCCEEEECCCCCEECCCCEEEEEECCCCCEE TFIDDAGEQQWAVDSITDCARRFMAHPQVKGRRVYGQVGFNFAAHARGIAFNAGEWPLLT EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHCCCEEECCCCCEEEE LTVPREELIFEKGNVTVYADSADGGRRLCEWVKEASTTTQNAPLAVDTALNGEAYKQQVA EECCHHHHEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHH RAVAEIRRGEYVKVIVSRAIPLPSRIDMPATLLYGRQANTPVRSFMFRQEGREALGFSPE HHHHHHHCCCCEEEHHHHCCCCCCCCCCCHHEEECCCCCCHHHHHHHHHCCHHHCCCCCC LVMSVTGNKVVTEPLAGTRDRMGNPEHNKAKEAELLHDSKEVLEHILSVKEAIAELEAVC EEEEECCCEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPGSVVVEDLMSVRQRGSVQHLGSGVSGQLAENKDAWDAFTVLFPSITASGIPKNAALNA CCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH IMQIEKTPRELYSGAILLLDDMRFDAALVLRSVFQDSQRCWIQAGAGIIAQSTPERELTE HHHHHCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHEEHHCCCCEEECCCCCHHHHH TREKLASIAPYLMV HHHHHHHHCCHHCC >Mature Secondary Structure MKISEFLHLALPEEQWLPTISGVLRQFAEEECYVYERQPCWYLGKGCLARLHINADGTQA CCHHHHHHHCCCCHHCCHHHHHHHHHHCCCCCEEEECCCCCEECCCCEEEEEECCCCCEE TFIDDAGEQQWAVDSITDCARRFMAHPQVKGRRVYGQVGFNFAAHARGIAFNAGEWPLLT EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHCCCEEECCCCCEEEE LTVPREELIFEKGNVTVYADSADGGRRLCEWVKEASTTTQNAPLAVDTALNGEAYKQQVA EECCHHHHEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHH RAVAEIRRGEYVKVIVSRAIPLPSRIDMPATLLYGRQANTPVRSFMFRQEGREALGFSPE HHHHHHHCCCCEEEHHHHCCCCCCCCCCCHHEEECCCCCCHHHHHHHHHCCHHHCCCCCC LVMSVTGNKVVTEPLAGTRDRMGNPEHNKAKEAELLHDSKEVLEHILSVKEAIAELEAVC EEEEECCCEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPGSVVVEDLMSVRQRGSVQHLGSGVSGQLAENKDAWDAFTVLFPSITASGIPKNAALNA CCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH IMQIEKTPRELYSGAILLLDDMRFDAALVLRSVFQDSQRCWIQAGAGIIAQSTPERELTE HHHHHCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHEEHHCCCCEEECCCCCHHHHH TREKLASIAPYLMV HHHHHHHHCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA