Click here to switch to the map view.

The map label for this gene is yecR

Identifier: 218689900

GI number: 218689900

Start: 2105465

End: 2105788

Strand: Direct

Name: yecR

Synonym: ECED1_2172

Alternate gene names: 218689900

Gene position: 2105465-2105788 (Clockwise)

Preceding gene: 218689899

Following gene: 218689901

Centisome position: 40.42

GC content: 50.31

Gene sequence:

>324_bases
ATGAGACTTCTGATTCTGACTCTTTCATTAATAACGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGT
TGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTC
GCGGGATCGCCGATCGCGCATGCCAGCAGGAAGGCTATACCCACGCGGTCCCCTTTGGTCAGCCAGTAGGCAACTGTAGC
CTTTTTGCGGGTTCCTTATGTTTGAATACGGAATTCACTTTGTCATATCAGTGCCATCATTCCGCCTTCCCTGTCTTTCT
CTAA

Upstream 100 bases:

>100_bases
CAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGTAAAATAGTGCTTTCT
CTTACTCTTCTGGCTGGACC

Downstream 100 bases:

>100_bases
ATATTTTAATCAGCGAGGGGATCTTCGCTGATTAAAGAAATAGCGGTAATGCGTTTTATTCCCATTCGTATTTTTAATAA
TTGAAGTTTATATTTTACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRACQQEGYTHAVPFGQPVGNCS
LFAGSLCLNTEFTLSYQCHHSAFPVFL

Sequences:

>Translated_107_residues
MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRACQQEGYTHAVPFGQPVGNCS
LFAGSLCLNTEFTLSYQCHHSAFPVFL
>Mature_107_residues
MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRACQQEGYTHAVPFGQPVGNCS
LFAGSLCLNTEFTLSYQCHHSAFPVFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788215, Length=107, Percent_Identity=100, Blast_Score=220, Evalue=1e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YECR_ECOLI (P76308)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   H64953
- RefSeq:   AP_002522.1
- RefSeq:   NP_416417.1
- STRING:   P76308
- EnsemblBacteria:   EBESCT00000002582
- EnsemblBacteria:   EBESCT00000017272
- GeneID:   946386
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW1892
- KEGG:   eco:b1904
- EchoBASE:   EB3790
- EcoGene:   EG14036
- eggNOG:   NOG13607
- GeneTree:   EBGT00050000011369
- HOGENOM:   HBG416025
- OMA:   NGTATRE
- ProtClustDB:   CLSK880240
- BioCyc:   EcoCyc:G7035-MONOMER
- Genevestigator:   P76308

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11742; Mature: 11742

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAFPVFL
HHHCCCEECCCCCCCCCCCEEEECEEEECCEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAFPVFL
HHHCCCEECCCCCCCCCCCEEEECEEEECCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503