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The map label for this gene is stfR [H]

Identifier: 218689812

GI number: 218689812

Start: 2028912

End: 2030474

Strand: Reverse

Name: stfR [H]

Synonym: ECED1_2081

Alternate gene names: 218689812

Gene position: 2030474-2028912 (Counterclockwise)

Preceding gene: 218689813

Following gene: 218689811

Centisome position: 38.98

GC content: 61.61

Gene sequence:

>1563_bases
ATGACAGTCAGAATATCGGGCGTGCTGAAGGACGGCACCGGGAAGCCGGTGCCGGGATGCACCATAGAGCTGAAAGCGCG
ACGCACCACAGAGACAGTGATAGTCACCACGGTGGCGCAGGGGCAGCCGGGGGAAACCGGCAGTTACAGTTTTGATGTGG
AGCCGGGGTGGTACCGGGTGACGCTGAACACGGAAGGGTACGCTCCGTCGTATGTGGGTGACATTCTGGTGAAGGCGGAT
TCTGAGCCGGGAACGCTGAATAAATTTCTGATGGAACAGGATGAGGCGCAGTATTACCCGAAAGCGCTTGCAGAGCTGGA
AGCGGTGGCAGCGGAAATCCTGAAGCGTGCTGAAGCGTCGGCGGCGAGTGCAGAGGAAGCGAAGAAACGGGCAGAGAATG
CCCGGGGACCGGCGGGCGAGAAGGGGGACACAGGTCCACAGGGTGCCACAGGGGCACAGGGACCAGCCGGGGCAACGGGG
GCGGTCGGACCAAAAGGTGAGCCGGGGCCAAAGGGAGAACGGGGAGAAACAGGTCCACAGGGACCGAAGGGCGATAAAGG
TGACCCGGGCGGACCGCCGGGGCCGAAAGGTGACACCGGCCCACGTGGAGAGGCCGGACCACCCGGACCACAGGGTCCGG
CAGGGCAAACCGGCCCGAAAGGGGATAAAGGTGAACCCGGCGCAACAGGTCCGGCAGGTCCCGCAGGCCCTCGGGGAGAA
ACCGGCCCCGCAGGTCCTGCGGGTCCCGCAGGCAGTGTCGCCAGTGTTCCGGATGCCAGCACATCACAGAAAGGTGTTGT
ACAGCTGAGCAGCGATACCAACAGCGATGATGAAACAAAAGCGGCAACCCCAAAGGCTGTGAAAGCGGTAATGGCAGAAG
TGCAGGCAGCAAAAACGAAGGCAGAAGAGGCAGCAACCCGGGCAGCAGTCCCCGGACCGAAGGGGGACAGGGGGGAACCT
GGCGCACCTGGTGCAGTGGGGCCCGCAGGCCCACGGGGACCGGCTGGTGCAGCTGGTCCCAAAGGTGATGCAGGCCCGGC
AGGCCCCGCAGGAAAGGATGGTACCGCCGGAGCGGAAGGTAAGGCAGGTCCGGCAGGGCCACGAGGTGAAAGGGGACCAG
CGGGGGCACAGGGTGTTCCGGGGCCGGTTGGTCCGGCAGGTCCTGCGGGTAAAACGGGGCCACGAGGTTTGCAGGGAGAA
ACAGGAAGACAGGGCCCGACAGGTCCACAGGGACCGACAGGTGAAACCGGACCACAGGGACCACAAGGGCCAACCGGAAG
GCTGGTACCCGGGGAAATTTACAGCATCGGAACATACATTATTGCCGCACTAGGCCCGTATATAACCGACATCGGCAGAA
CCTATCAGCCAGGAGAAACTGTATCGGGTTCACGCCTTAAGCGATGCGCCCTAATCAAAGACGAAAACGGAAACTATATG
AAAGCTAACACCGATGGCATTGACGGCATACTATCCTCAGTTCCGGGCTCATGGATGGTGTGTAATGAAATTACGTCGAC
AAATGATAATGAAAGCATCGGGCTGTTCCAGCGCGCATACTGA

Upstream 100 bases:

>100_bases
CTTTGACTGACGGCACCCTTTAACACCAGCCAGTCACAATTTATACCCCTGATCGCAGACCGGGTAACCGGTACTGCGGT
TTTTTTTATGGGAGAAATCT

Downstream 100 bases:

>100_bases
CAGACAGGAGATGACATGAATGTGGAAAAAAATAAGCAATCCGCAATGGGCAGATAAAGAGCACACTGCTGTCAATTGCA
TGGTGAAGTTTGAGCACATT

Product: putative tail fiber protein from prophage

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MTVRISGVLKDGTGKPVPGCTIELKARRTTETVIVTTVAQGQPGETGSYSFDVEPGWYRVTLNTEGYAPSYVGDILVKAD
SEPGTLNKFLMEQDEAQYYPKALAELEAVAAEILKRAEASAASAEEAKKRAENARGPAGEKGDTGPQGATGAQGPAGATG
AVGPKGEPGPKGERGETGPQGPKGDKGDPGGPPGPKGDTGPRGEAGPPGPQGPAGQTGPKGDKGEPGATGPAGPAGPRGE
TGPAGPAGPAGSVASVPDASTSQKGVVQLSSDTNSDDETKAATPKAVKAVMAEVQAAKTKAEEAATRAAVPGPKGDRGEP
GAPGAVGPAGPRGPAGAAGPKGDAGPAGPAGKDGTAGAEGKAGPAGPRGERGPAGAQGVPGPVGPAGPAGKTGPRGLQGE
TGRQGPTGPQGPTGETGPQGPQGPTGRLVPGEIYSIGTYIIAALGPYITDIGRTYQPGETVSGSRLKRCALIKDENGNYM
KANTDGIDGILSSVPGSWMVCNEITSTNDNESIGLFQRAY

Sequences:

>Translated_520_residues
MTVRISGVLKDGTGKPVPGCTIELKARRTTETVIVTTVAQGQPGETGSYSFDVEPGWYRVTLNTEGYAPSYVGDILVKAD
SEPGTLNKFLMEQDEAQYYPKALAELEAVAAEILKRAEASAASAEEAKKRAENARGPAGEKGDTGPQGATGAQGPAGATG
AVGPKGEPGPKGERGETGPQGPKGDKGDPGGPPGPKGDTGPRGEAGPPGPQGPAGQTGPKGDKGEPGATGPAGPAGPRGE
TGPAGPAGPAGSVASVPDASTSQKGVVQLSSDTNSDDETKAATPKAVKAVMAEVQAAKTKAEEAATRAAVPGPKGDRGEP
GAPGAVGPAGPRGPAGAAGPKGDAGPAGPAGKDGTAGAEGKAGPAGPRGERGPAGAQGVPGPVGPAGPAGKTGPRGLQGE
TGRQGPTGPQGPTGETGPQGPQGPTGRLVPGEIYSIGTYIIAALGPYITDIGRTYQPGETVSGSRLKRCALIKDENGNYM
KANTDGIDGILSSVPGSWMVCNEITSTNDNESIGLFQRAY
>Mature_519_residues
TVRISGVLKDGTGKPVPGCTIELKARRTTETVIVTTVAQGQPGETGSYSFDVEPGWYRVTLNTEGYAPSYVGDILVKADS
EPGTLNKFLMEQDEAQYYPKALAELEAVAAEILKRAEASAASAEEAKKRAENARGPAGEKGDTGPQGATGAQGPAGATGA
VGPKGEPGPKGERGETGPQGPKGDKGDPGGPPGPKGDTGPRGEAGPPGPQGPAGQTGPKGDKGEPGATGPAGPAGPRGET
GPAGPAGPAGSVASVPDASTSQKGVVQLSSDTNSDDETKAATPKAVKAVMAEVQAAKTKAEEAATRAAVPGPKGDRGEPG
APGAVGPAGPRGPAGAAGPKGDAGPAGPAGKDGTAGAEGKAGPAGPRGERGPAGAQGVPGPVGPAGPAGKTGPRGLQGET
GRQGPTGPQGPTGETGPQGPQGPTGRLVPGEIYSIGTYIIAALGPYITDIGRTYQPGETVSGSRLKRCALIKDENGNYMK
ANTDGIDGILSSVPGSWMVCNEITSTNDNESIGLFQRAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tail fiber family [H]

Homologues:

Organism=Homo sapiens, GI183583553, Length=331, Percent_Identity=35.0453172205438, Blast_Score=142, Evalue=9e-34,
Organism=Homo sapiens, GI115392133, Length=293, Percent_Identity=37.8839590443686, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI89363017, Length=297, Percent_Identity=40.0673400673401, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI4502961, Length=320, Percent_Identity=36.875, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI5803080, Length=312, Percent_Identity=37.5, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI65301115, Length=185, Percent_Identity=41.0810810810811, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI110735435, Length=355, Percent_Identity=34.6478873239437, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI56847616, Length=152, Percent_Identity=46.0526315789474, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI111118976, Length=344, Percent_Identity=38.953488372093, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI115527070, Length=328, Percent_Identity=32.9268292682927, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI115527066, Length=328, Percent_Identity=32.9268292682927, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI48762934, Length=248, Percent_Identity=39.1129032258064, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI18780273, Length=302, Percent_Identity=34.1059602649007, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI111118974, Length=344, Percent_Identity=38.953488372093, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI115527062, Length=328, Percent_Identity=32.9268292682927, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI122937273, Length=267, Percent_Identity=35.2059925093633, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI40805823, Length=394, Percent_Identity=28.1725888324873, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI38570075, Length=377, Percent_Identity=34.4827586206897, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI156616290, Length=282, Percent_Identity=35.4609929078014, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI154759255, Length=314, Percent_Identity=33.1210191082803, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI32140760, Length=370, Percent_Identity=33.5135135135135, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI119829187, Length=267, Percent_Identity=38.5767790262172, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI38570073, Length=357, Percent_Identity=35.0140056022409, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI11386161, Length=326, Percent_Identity=35.8895705521472, Blast_Score=77, Evalue=6e-14,
Organism=Homo sapiens, GI111118970, Length=329, Percent_Identity=35.5623100303951, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI111118968, Length=329, Percent_Identity=35.5623100303951, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI111118972, Length=329, Percent_Identity=35.5623100303951, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI98985806, Length=302, Percent_Identity=41.3907284768212, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI98985810, Length=302, Percent_Identity=41.3907284768212, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI73486666, Length=353, Percent_Identity=33.9943342776204, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI299523257, Length=302, Percent_Identity=41.3907284768212, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI18105016, Length=97, Percent_Identity=50.5154639175258, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI18105018, Length=97, Percent_Identity=50.5154639175258, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI299523253, Length=302, Percent_Identity=41.3907284768212, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI4502951, Length=312, Percent_Identity=36.5384615384615, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI145701009, Length=97, Percent_Identity=50.5154639175258, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI116256354, Length=321, Percent_Identity=37.3831775700935, Blast_Score=66, Evalue=9e-11,
Organism=Escherichia coli, GI87081892, Length=123, Percent_Identity=53.6585365853659, Blast_Score=129, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI71992048, Length=324, Percent_Identity=38.2716049382716, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17569903, Length=116, Percent_Identity=46.551724137931, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71988210, Length=323, Percent_Identity=35.9133126934984, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71988208, Length=323, Percent_Identity=35.9133126934984, Blast_Score=66, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17539078, Length=116, Percent_Identity=46.551724137931, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI17137252, Length=346, Percent_Identity=35.5491329479769, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24581820, Length=360, Percent_Identity=35.2777777777778, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24581822, Length=360, Percent_Identity=35.2777777777778, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24581824, Length=360, Percent_Identity=35.2777777777778, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI45549584, Length=114, Percent_Identity=50, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI221379525, Length=116, Percent_Identity=43.1034482758621, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI221379533, Length=116, Percent_Identity=43.1034482758621, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008969
- InterPro:   IPR014766
- InterPro:   IPR011083
- InterPro:   IPR005003
- InterPro:   IPR013609 [H]

Pfam domain/function: PF07484 Collar; PF03335 Phage_fiber; PF08400 phage_tail_N [H]

EC number: NA

Molecular weight: Translated: 51094; Mature: 50963

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRISGVLKDGTGKPVPGCTIELKARRTTETVIVTTVAQGQPGETGSYSFDVEPGWYRV
CEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCEEEECCCCEEEE
TLNTEGYAPSYVGDILVKADSEPGTLNKFLMEQDEAQYYPKALAELEAVAAEILKRAEAS
EECCCCCCHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASAEEAKKRAENARGPAGEKGDTGPQGATGAQGPAGATGAVGPKGEPGPKGERGETGPQ
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPKGDKGDPGGPPGPKGDTGPRGEAGPPGPQGPAGQTGPKGDKGEPGATGPAGPAGPRGE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPAGPAGPAGSVASVPDASTSQKGVVQLSSDTNSDDETKAATPKAVKAVMAEVQAAKTK
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHH
AEEAATRAAVPGPKGDRGEPGAPGAVGPAGPRGPAGAAGPKGDAGPAGPAGKDGTAGAEG
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KAGPAGPRGERGPAGAQGVPGPVGPAGPAGKTGPRGLQGETGRQGPTGPQGPTGETGPQG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PQGPTGRLVPGEIYSIGTYIIAALGPYITDIGRTYQPGETVSGSRLKRCALIKDENGNYM
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEEECCCCCEE
KANTDGIDGILSSVPGSWMVCNEITSTNDNESIGLFQRAY
ECCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
TVRISGVLKDGTGKPVPGCTIELKARRTTETVIVTTVAQGQPGETGSYSFDVEPGWYRV
EEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCEEEECCCCEEEE
TLNTEGYAPSYVGDILVKADSEPGTLNKFLMEQDEAQYYPKALAELEAVAAEILKRAEAS
EECCCCCCHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASAEEAKKRAENARGPAGEKGDTGPQGATGAQGPAGATGAVGPKGEPGPKGERGETGPQ
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPKGDKGDPGGPPGPKGDTGPRGEAGPPGPQGPAGQTGPKGDKGEPGATGPAGPAGPRGE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPAGPAGPAGSVASVPDASTSQKGVVQLSSDTNSDDETKAATPKAVKAVMAEVQAAKTK
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHH
AEEAATRAAVPGPKGDRGEPGAPGAVGPAGPRGPAGAAGPKGDAGPAGPAGKDGTAGAEG
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KAGPAGPRGERGPAGAQGVPGPVGPAGPAGKTGPRGLQGETGRQGPTGPQGPTGETGPQG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PQGPTGRLVPGEIYSIGTYIIAALGPYITDIGRTYQPGETVSGSRLKRCALIKDENGNYM
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEEECCCCCEE
KANTDGIDGILSSVPGSWMVCNEITSTNDNESIGLFQRAY
ECCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]